CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA03277
(
Caenorhabditis japonica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CJA03277
T083735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lin-48
M00614_2.00
Caenorhabditis elegans
HCCGTTAB
VTAACGGD
PBM
Narasimhan et al.(2015)
pTH9155
0.827
0.971
ovo
M03669_2.00
Drosophila melanogaster
DNMCCGTTA
TAACGGKNH
SELEX
Nitta et al.(2015)
ovo_1
0.790
0.826
ovo
M06064_2.00
Drosophila melanogaster
CHGTTAHW
WDTAACDG
B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028
0.790
0.826
ovo
M06065_2.00
Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY
B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028
0.790
0.826
ovo
M06066_2.00
Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH
B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028
0.790
0.826
ovo
M02671_2.00
Drosophila melanogaster
DCNGTTWSD
HSWAACNGH
SELEX
Mathelier et al.(2014)
MA0126.1
0.790
0.826
ovo
M09662_2.00
Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH
Misc
Kulakovskiy et al.(2009)
ovo
0.790
0.826
ovo
M10373_2.00
Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN
Transfac
Matys et al.(2006)
I$OVO_01
0.790
0.826
ovo
M10374_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$OVO_Q6
0.790
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA03277a
C2H2 ZF
127
149
MTCHICGKKFGLQRLLNRHVKCH
CJA03277a
C2H2 ZF
155
177
YLCTFCGKGFNDTFDLKRHTRTH
CJA03277a
C2H2 ZF
183
206
YKCEQCEKSFTQRCSLESHLRKVH
CJA03277b
C2H2 ZF
141
163
MTCHICGKKFGLQRLLNRHVKCH
CJA03277b
C2H2 ZF
169
191
YLCTFCGKGFNDTFDLKRHTRTH
CJA03277b
C2H2 ZF
197
220
YKCEQCEKSFTQRCSLESHLRKVH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis japonica
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG09216
Caenorhabditis briggsae
CBG09216
I
0.827
CJA37604
Caenorhabditis japonica
CJA37604
I
0.827
CRE25436
Caenorhabditis remanei
CRE25436
I
0.827
lin-48
Caenorhabditis elegans
WBGene00003033
D
0.827
Bm3814
Brugia malayi
Bm3814
I
0.820
BTMF_0001741201
Brugia timori
BTMF_0001741201
I
0.820
CBN00506
Caenorhabditis brenneri
CBN00506
I
0.811
RPRC002781
Rhodnius prolixus
RPRC002781
I
0.809
CLEC002514
Cimex lectularius
CLEC002514
I
0.809
HHAL005991-PA
Halyomorpha halys
HHAL005991-PA
I
0.809
HCOI01936300
Haemonchus contortus
HCOI01936300
I
0.808
TELCIR_07985
Teladorsagia circumcincta
TELCIR_07985
I
0.808
ACEP17857
Atta cephalotes
ACEP17857
I
0.806
GB51354
Apis mellifera
GB51354
I
0.806
SINV17081
Solenopsis invicta
SINV17081
I
0.806
Cflo_08035--XP_624482.2_APIME
Camponotus floridanus
Cflo_08035--XP_624482.2_APIME
I
0.806
NECAME_03083
Necator americanus
NECAME_03083
I
0.804
L898_g2421
Steinernema monticolum
L898_g2421
I
0.800
CapteG147941
Capitella teleta
CapteG147941
I
0.796
CpipJ_CPIJ018505
Culex pipiens
CpipJ_CPIJ018505
I
0.794
AAEL017521
Aedes aegypti
AAEL017521
I
0.794
ADAC004491
Anopheles darlingi
ADAC004491
I
0.794
AGAP000114
Anopheles gambiae
AGAP000114
I
0.794
CPIJ018505
Culex quinquefasciatus
CPIJ018505
I
0.794
HMEL006827
Heliconius melpomene
HMEL006827
I
0.794
TC008099
Tribolium castaneum
TC008099
I
0.794
LCUP004963
Lucilia cuprina
LCUP004963
I
0.794
LDEC009536
Leptinotarsa decemlineata
LDEC009536
I
0.794
AARA001055
Anopheles arabiensis
AARA001055
I
0.794
AATE002741
Anopheles atroparvus
AATE002741
I
0.794
ACHR004136
Anopheles christyi
ACHR004136
I
0.794
ACUA027175
Anopheles culicifacies
ACUA027175
I
0.794
ADIR001008
Anopheles dirus
ADIR001008
I
0.794
AFUN010393
Anopheles funestus
AFUN010393
I
0.794
AMEC022552
Anopheles melas
AMEC022552
I
0.794
AMEM014020
Anopheles merus
AMEM014020
I
0.794
ASIS014406
Anopheles sinensis
ASIS014406
I
0.794
ASTEI07557
Anopheles stephensi
ASTEI07557
I
0.794
PPAI008669
Phlebotomus papatasi
PPAI008669
I
0.794
ACYPI003064
Acyrthosiphon pisum
ACYPI003064
I
0.790
BGIBMGA000988
Bombyx mori
BGIBMGA000988
I
0.790
ovo
Drosophila melanogaster
FBgn0003028
D
0.790
ovo
Drosophila virilis
FBgn0064309
I
0.790
GF20355
Drosophila ananassae
FBgn0097362
I
0.790
GG18741
Drosophila erecta
FBgn0110950
I
0.790
GH24684
Drosophila grimshawi
FBgn0132140
I
0.790
GI21666
Drosophila mojavensis
FBgn0144396
I
0.790
GL26817
Drosophila persimilis
FBgn0164398
I
0.790
GM12381
Drosophila sechellia
FBgn0167318
I
0.790
GD24377
Drosophila simulans
FBgn0195718
I
0.790
GK10250
Drosophila willistoni
FBgn0212265
I
0.790
GE16381
Drosophila yakuba
FBgn0233910
I
0.790
GA22634
Drosophila pseudoobscura
FBgn0244037
I
0.790
ISCW013547
Ixodes scapularis
ISCW013547
I
0.790
KGM_02259
Danaus plexippus
KGM_02259
I
0.790
L798_11303
Zootermopsis nevadensis
L798_11303
I
0.790
MCINX009401
Melitaea cinxia
MCINX009401
I
0.790
PHUM086430
Pediculus humanus
PHUM086430
I
0.790
SMAR006131
Strigamia maritima
SMAR006131
I
0.786
SPU_012448
Strongylocentrotus purpuratus
SPU_012448
I
0.774
tetur12g02740
Tetranychus urticae
tetur12g02740
I
0.774
tetur12g02760
Tetranychus urticae
tetur12g02760
I
0.774
tetur12g02810
Tetranychus urticae
tetur12g02810
I
0.774
tetur157g00030
Tetranychus urticae
tetur157g00030
I
0.774
MDOA012259
Musca domestica
MDOA012259
I
0.774
tetur12g02770
Tetranychus urticae
tetur12g02770
I
0.770
tetur12g02860
Tetranychus urticae
tetur12g02860
I
0.770
Sakowv30033343m.g
Saccoglossus kowalevskii
Sakowv30033343m.g
I
0.770
SMU15000684
Schmidtea mediterranea
SMU15000684
I
0.763
SBAD_0001064501
Soboliphyme baturini
SBAD_0001064501
I
0.761