AMTR_s00017p00206510 (Amborella trichopoda)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 AMTR_s00017p00206510 T164263_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN08648 CSD 7 73

Links

Other CSD family TFs
Other Amborella trichopoda TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.712
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.712
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.712
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.712
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.727
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.758
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N 0.712
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.758
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.758
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N 0.712
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.742
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.742
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.758
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.758
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.712
gene11124-v1.0-hybrid Fragaria vesca gene11124-v1.0-hybrid N 0.712
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.742
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.758
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.738
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.742
MDP0000202739 Malus domestica MDP0000202739 N 0.742
MDP0000225222 Malus domestica MDP0000225222 N 0.727
OBART02G01600 Oryza barthii OBART02G01600 N 0.712
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.712
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.712
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.712
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N 0.712
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.712
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.712
OS02G0121100 Oryza sativa OS02G0121100 N 0.712
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.714
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.742
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.742
PK01533.1 Cannabis sativa PK01533.1 N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.742
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.727
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.742
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.758