SapurV1A.0216s0150 (Salix purpurea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SapurV1A.0216s0150 T196794_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.848 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.848 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.843 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.843 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.842 0.833
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.838 0.861
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.838 0.861
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.837 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.834 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.778
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.778
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.778
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.778
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.750
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0216s0150.1.p GATA 231 266
SapurV1A.0216s0150.2.p GATA 231 266

Links

Other GATA family TFs
Other Salix purpurea TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29883.m002035 Ricinus communis 29883.m002035 I
30072.m000955 Ricinus communis 30072.m000955 I
30174.m008898 Ricinus communis 30174.m008898 I
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
LBD16 Arabidopsis thaliana AT2G42430 D
LBD20 Arabidopsis thaliana AT3G03760 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
BGIOSGA032254 Oryza indica BGIOSGA032254 I
Bo1g153580 Brassica oleracea Bo1g153580 I
Bo4g016000 Brassica oleracea Bo4g016000 I
Bo4g191530 Brassica oleracea Bo4g191530 I
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I
Bra004693 Brassica rapa Bra004693 I
Bra036436 Brassica rapa Bra036436 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I
Carubv10015417m.g Capsella rubella Carubv10015417m.g I
cassava15337.m1 Manihot esculenta cassava15337.m1 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava25975.m1 Manihot esculenta cassava25975.m1 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
Ca_12213 Cicer arietinum Ca_12213 I
Ca_19716 Cicer arietinum Ca_19716 I
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
Cla002965 Citrullus lanatus Cla002965 I
Cla007068 Citrullus lanatus Cla007068 I
Cucsa.338130 Cucumis sativus Cucsa.338130 I
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I
GLYMA02G27230 Glycine max GLYMA02G27230 I
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G31830 Glycine max GLYMA03G31830 I
GLYMA10G11031 Glycine max GLYMA10G11031 I
GLYMA19G30200 Glycine max GLYMA19G30200 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000322059 Malus domestica MDP0000322059 I
mgf006429m Mimulus guttatus mgf006429m I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MTR_6g027710 Medicago truncatula MTR_6g027710 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
OB10G12360 Oryza brachyantha OB10G12360 I
OBART03G10450 Oryza barthii OBART03G10450 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
ONIVA10G03250 Oryza nivara ONIVA10G03250 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
OPUNC10G02630 Oryza punctata OPUNC10G02630 I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I
OS03G0246900 Oryza sativa OS03G0246900 I
OS10G0162600 Oryza sativa OS10G0162600 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I
Pm017936 Prunus mume Pm017936 I
Pm020629 Prunus mume Pm020629 I
Pm028642 Prunus mume Pm028642 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
LBD16 Arabidopsis lyrata scaffold_403099.1 I
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I
TCM_004106 Theobroma cacao TCM_004106 I
TCM_005496 Theobroma cacao TCM_005496 I
TCM_025849 Theobroma cacao TCM_025849 I
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
LBD20 Vitis vinifera VIT_08s0056g01650 I
LBD30 Vitis vinifera VIT_15s0048g00830 I