CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc13g09440
(
Penicillium chrysogenum
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
Pc13g09440
T199623_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc13g09440.t1
Grainyhead
201
447
SLNDVHVETSSNLTASTDFSAQMAGDMSYANGEKFRFSASLRAPTAMVKNTSEIPVTYLNKGQAYNLSVIDTSPPIVNHEPLRYRTFIRVSFEEREQRMKPSACWQLWKEGRGTTEAHQRGGKLLAVEYVDPLQGGSDAHRNRQVQVESMLVDGFCVTWTANPTTGAAECNIPVRFNFLSTDFSHSKGVKGIPVRLCAKTELLSPGEEAGVSRDTELSYCKVKLFRDHGAERKLSNDVAHVKKTIDK
Links
Other
Grainyhead
family TFs
Other
Penicillium chrysogenum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RGL2
Arabidopsis thaliana
AT3G03450
D
RGL3
Arabidopsis thaliana
AT5G17490
I
Bo5g149920
Brassica oleracea
Bo5g149920
I
Bo9g160170
Brassica oleracea
Bo9g160170
I
Bostr.19046s0061
Boechera stricta
Bostr.19046s0061
I
Bostr.26527s0463
Boechera stricta
Bostr.26527s0463
I
Bra013973
Brassica rapa
Bra013973
I
Cagra.2098s0043
Capsella grandiflora
Cagra.2098s0043
I
Cagra.6170s0019
Capsella grandiflora
Cagra.6170s0019
I
Carubv10003592m.g
Capsella rubella
Carubv10003592m.g
I
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
Ca_13295
Cicer arietinum
Ca_13295
I
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
RGL2
Arabidopsis lyrata
fgenesh2_kg.3__292__AT3G03450.1
I
RGL3
Arabidopsis lyrata
fgenesh2_kg.6__1749__AT5G17490.1
I
GLYMA11G33720
Glycine max
GLYMA11G33720
I
GLYMA18G04500
Glycine max
GLYMA18G04500
I
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
LjT15P09.140.nc
Lotus japonicus
LjT15P09.140.nc
N
LjT40K11.90.nc
Lotus japonicus
LjT40K11.90.nc
N
MDP0000669451
Malus domestica
MDP0000669451
I
Pm014329
Prunus mume
Pm014329
I
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
Thhalv10015535m.g
Eutrema salsugineum
Thhalv10015535m.g
I
Thhalv10020431m.g
Eutrema salsugineum
Thhalv10020431m.g
I
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I