POPTR_0014s16230 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0014s16230 T201233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s16230.1 GRAS 177 547

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29908.m005953 Ricinus communis 29908.m005953 I 0.000
30078.m002329 Ricinus communis 30078.m002329 I 0.000
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.000
ARF17 Arabidopsis thaliana AT1G77850 N 0.000
ARF16 Arabidopsis thaliana AT4G30080 D 0.000
ARF10 Oryza indica BGIOSGA016767 I 0.000
Bo1g014600 Brassica oleracea Bo1g014600 I 0.000
Bo6g081980 Brassica oleracea Bo6g081980 N 0.000
Bo6g121520 Brassica oleracea Bo6g121520 N 0.000
Bo7g114200 Brassica oleracea Bo7g114200 I 0.000
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.000
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.000
Bra003665 Brassica rapa Bra003665 N 0.000
Bra011162 Brassica rapa Bra011162 I 0.000
Bra015651 Brassica rapa Bra015651 N 0.000
Bra024109 Brassica rapa Bra024109 I 0.000
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.000
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.000
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.000
Cagra.24523s0002 Capsella grandiflora Cagra.24523s0002 N 0.000
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.000
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.000
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.000
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.000
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.000
Cla022413 Citrullus lanatus Cla022413 I 0.000
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.000
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.000
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.000
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.000
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.000
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.000
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.000
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.000
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.000
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.000
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.000
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.000
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.000
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.000
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.000
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.000
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.000
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.000
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.000
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.000
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.000
MDP0000232116 Malus domestica MDP0000232116 N 0.000
MDP0000256621 Malus domestica MDP0000256621 I 0.000
mgf000336m Mimulus guttatus mgf000336m I 0.000
mgf005300m Mimulus guttatus mgf005300m I 0.000
mgf024607m Mimulus guttatus mgf024607m I 0.000
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.000
OB06G32920 Oryza brachyantha OB06G32920 I 0.000
OBART04G18910 Oryza barthii OBART04G18910 I 0.000
OBART06G25230 Oryza barthii OBART06G25230 I 0.000
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.000
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.000
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.000
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.000
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.000
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.000
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.000
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.000
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.000
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.000
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.000
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.000
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.000
OS04G0519700 Oryza sativa OS04G0519700 I 0.000
ARF18 Oryza sativa OS06G0685700 I 0.000
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.000
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.000
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.000
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.000
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.000
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N 0.000
Pm019126 Prunus mume Pm019126 I 0.000
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.000
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.000
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.000
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.000
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.000
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.000
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.000
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.000
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.000
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.000
Si005991m.g Setaria italica Si005991m.g I 0.000
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.000
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.000
TCM_022163 Theobroma cacao TCM_022163 I 0.000
TCM_035002 Theobroma cacao TCM_035002 I 0.000
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.000
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.000
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.000