MDOA012478 (Musca domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDOA012478 T232609_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.867 1.000
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.867 1.000
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.867 1.000
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.858 0.947
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.858 0.947
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.858 0.947
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.832 0.930
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.815 0.930
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.815 0.930
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.815 0.930
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.815 0.930
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.815 0.930
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.815 0.930
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.788 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDOA012478-PA Homeodomain 200 259

Links

Other Homeodomain family TFs
Other Musca domestica TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.1936.1.1 Phytophthora capsici e_gw1.1936.1.1 N
e_gw1.2.501.1 Phytophthora capsici e_gw1.2.501.1 N
e_gw1.34.32.1 Phytophthora capsici e_gw1.34.32.1 N
e_gw1.34.40.1 Phytophthora capsici e_gw1.34.40.1 N
F443_10160 Phytophthora parasitica F443_10160 N
F443_10163 Phytophthora parasitica F443_10163 N
F443_10168 Phytophthora parasitica F443_10168 N
F443_10169 Phytophthora parasitica F443_10169 N
fgenesh_scip_prom.28083.659 Phytophthora lateralis fgenesh_scip_prom.28083.659 N
fgenesh_scip_prom.28083.9722 Phytophthora lateralis fgenesh_scip_prom.28083.9722 N
fgenesh_scip_prom.46568.9633 Phytophthora kernoviae fgenesh_scip_prom.46568.9633 N
fgenesh_scip_prom.46568.9634 Phytophthora kernoviae fgenesh_scip_prom.46568.9634 N
maker-pir_contig_2201-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2201-fgenesh-gene-0.0 N
maker-pir_contig_723-snap-gene-0.9 Pythium irregulare maker-pir_contig_723-snap-gene-0.9 N
Phyra76421 Phytophthora ramorum Phyra76421 N
Phyra76423 Phytophthora ramorum Phyra76423 N
Phyra76424 Phytophthora ramorum Phyra76424 N
Physo128916 Phytophthora sojae Physo128916 N
Physo128919 Phytophthora sojae Physo128919 N
PYU1_G008748 Pythium ultimum PYU1_G008748 N
PYU1_G008755 Pythium ultimum PYU1_G008755 N
PYU1_G008756 Pythium ultimum PYU1_G008756 N
PYU1_G008757 Pythium ultimum PYU1_G008757 N
snap_masked-pve_contig_11-abinit-gene-0.108 Pythium vexans snap_masked-pve_contig_11-abinit-gene-0.108 N