PGSC0003DMG400004880 (Solanum tuberosum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PGSC0003DMG400004880 T245811_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400012498 LOB 62 160

Links

Other LOB family TFs
Other Solanum tuberosum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28694.m000665 Ricinus communis 28694.m000665 N 0.869
LBD22 Arabidopsis thaliana AT3G13850 N 0.758
Bo1g134830 Brassica oleracea Bo1g134830 N 0.778
Bo5g132010 Brassica oleracea Bo5g132010 N 0.778
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.758
Bra021513 Brassica rapa Bra021513 N 0.778
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.758
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.768
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.879
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.889
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.889
Ca_10077 Cicer arietinum Ca_10077 N 0.818
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.788
Cla015827 Citrullus lanatus Cla015827 N 0.859
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.859
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.828
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.758
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.818
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.768
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.768
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.818
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.768
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.788
MDP0000257227 Malus domestica MDP0000257227 N 0.889
mgf019664m Mimulus guttatus mgf019664m N 0.818
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.808
Pm013344 Prunus mume Pm013344 N 0.859
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.838
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.838
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.848
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.957
TCM_029050 Theobroma cacao TCM_029050 N 0.788
TCM_029052 Theobroma cacao TCM_029052 N 0.828
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.737