GSMUA_Achr8G23650_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr8G23650_001 T249174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.829 0.644
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P23650_001 MADF 89 168

Links

Other MADF family TFs
Other Musa acuminata TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I 0.873
29814.m000741 Ricinus communis 29814.m000741 I 0.875
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.891
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.859
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.859
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.829
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.870
ASIL2 Arabidopsis thaliana AT3G14180 D 0.829
Bo3g065930 Brassica oleracea Bo3g065930 I 0.858
Bo5g136850 Brassica oleracea Bo5g136850 I 0.871
Bo9g177060 Brassica oleracea Bo9g177060 I 0.825
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.870
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.829
Bra014370 Brassica rapa Bra014370 I 0.814
Bra034165 Brassica rapa Bra034165 I 0.818
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.829
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.829
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.859
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.859
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.859
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.857
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.857
Cla015773 Citrullus lanatus Cla015773 I 0.859
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.859
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.857
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.829
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.886
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.857
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.858
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.859
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.845
GRMZM2G392168 Zea mays GRMZM2G392168 N 0.817
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.960
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.883
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.913
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.885
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.817
MDP0000097759 Malus domestica MDP0000097759 N 0.857
MDP0000255104 Malus domestica MDP0000255104 I 0.897
MDP0000281471 Malus domestica MDP0000281471 I 0.897
MDP0000943251 Malus domestica MDP0000943251 N 0.841
mgf000047m Mimulus guttatus mgf000047m I 0.841
mgf001239m Mimulus guttatus mgf001239m N 0.844
mgf006505m Mimulus guttatus mgf006505m I 0.832
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.896
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.857
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.857
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.837
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.836
PK22475.1 Cannabis sativa PK22475.1 N 0.859
Pm013209 Prunus mume Pm013209 I 0.886
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.884
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.876
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.886
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.864
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.876
Sb06g017920 Sorghum bicolor Sb06g017920 N 0.821
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.870
Si010246m.g Setaria italica Si010246m.g N 0.846
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.836
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.837
TCM_029209 Theobroma cacao TCM_029209 I 0.871
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.814
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.829
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.871
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.851