cassava1476.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava1476.valid.m1 T250457_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava1476.valid.m1 MADF 177 250

Links

Other MADF family TFs
Other Manihot esculenta TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Bra018490 Brassica rapa Bra018490 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
Cla005226 Citrullus lanatus Cla005226 I
Cla009163 Citrullus lanatus Cla009163 I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
Gorai.013G168300 Gossypium raimondii Gorai.013G168300 I
Gorai.013G210600 Gossypium raimondii Gorai.013G210600 N
Gorai.013G210700 Gossypium raimondii Gorai.013G210700 N
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
MDP0000846004 Malus domestica MDP0000846004 I
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
TCM_026842 Theobroma cacao TCM_026842 I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I