Gorai.010G062800 (Gossypium raimondii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Gorai.010G062800 T261523_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G062800.1 MBD 5 78

Links

Other MBD family TFs
Other Gossypium raimondii TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29841.m002855 Ricinus communis 29841.m002855 N 0.000
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.000
MBD10 Arabidopsis thaliana AT1G15340 N 0.000
MBD11 Arabidopsis thaliana AT3G15790 N 0.000
Bo8g066360 Brassica oleracea Bo8g066360 N 0.000
Bo8g106130 Brassica oleracea Bo8g106130 N 0.000
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.000
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.000
Bra016665 Brassica rapa Bra016665 N 0.000
Bra021136 Brassica rapa Bra021136 N 0.000
Bra026773 Brassica rapa Bra026773 N 0.000
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.000
Ca_06682 Cicer arietinum Ca_06682 N 0.753
Ca_19192 Cicer arietinum Ca_19192 N 0.703
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.712
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.703
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.776
Cla012920 Citrullus lanatus Cla012920 N 0.000
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.000
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.786
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.730
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.712
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.716
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.703
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.000
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.000
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.000
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.000
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.703
MDP0000301302 Malus domestica MDP0000301302 N 0.741
MDP0000375866 Malus domestica MDP0000375866 N 0.716
MDP0000574053 Malus domestica MDP0000574053 N 0.703
MTR_4g010210 Medicago truncatula MTR_4g010210 N 0.000
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.730
PK04144.1 Cannabis sativa PK04144.1 N 0.730
PK24888.1 Cannabis sativa PK24888.1 N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.000
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.000
TCM_027169 Theobroma cacao TCM_027169 N 0.000
TCM_038107 Theobroma cacao TCM_038107 N 0.797
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.000
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.000