BRADI2G31887 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI2G31887 T268234_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.723 0.835
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.691 0.806
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.683 0.784
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.683 0.784
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.683 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G31887.1 Myb 50 96
BRADI2G31887.1 Myb 102 148
BRADI2G31887.1 Myb 154 198

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003447 Ricinus communis 29794.m003447 I 0.701
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.686
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.708
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.683
MYB3R4 Arabidopsis thaliana AT5G11510 D 0.683
Bo1g010040 Brassica oleracea Bo1g010040 I 0.679
Bo3g007070 Brassica oleracea Bo3g007070 I 0.687
Bo3g171130 Brassica oleracea Bo3g171130 I 0.678
Bo3g179620 Brassica oleracea Bo3g179620 I 0.687
Bo7g115810 Brassica oleracea Bo7g115810 I 0.690
Bo9g171130 Brassica oleracea Bo9g171130 I 0.681
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I 0.683
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.683
Bra006102 Brassica rapa Bra006102 I 0.687
Bra008956 Brassica rapa Bra008956 I 0.681
Bra011376 Brassica rapa Bra011376 I 0.679
Bra034531 Brassica rapa Bra034531 I 0.678
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I 0.666
Carubv10000155m.g Capsella rubella Carubv10000155m.g I 0.666
Ca_01884 Cicer arietinum Ca_01884 I 0.731
Ca_14925 Cicer arietinum Ca_14925 I 0.695
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.730
Cla022565 Citrullus lanatus Cla022565 I 0.728
Cla023357 Citrullus lanatus Cla023357 I 0.719
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.728
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.719
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.728
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.730
F775_05724 Aegilops tauschii F775_05724 I 0.768
F775_10106 Aegilops tauschii F775_10106 I 0.665
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I 0.683
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.683
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.733
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.717
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.717
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.706
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.703
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.691
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.717
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.723
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.717
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.749
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.728
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.740
MDP0000179225 Malus domestica MDP0000179225 I 0.725
MDP0000295807 Malus domestica MDP0000295807 I 0.706
mgf006384m Mimulus guttatus mgf006384m I 0.675
mgf008601m Mimulus guttatus mgf008601m I 0.729
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.751
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.706
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.715
OB01G18340 Oryza brachyantha OB01G18340 I 0.783
OB12G16480 Oryza brachyantha OB12G16480 I 0.794
OBART01G08110 Oryza barthii OBART01G08110 I 0.767
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.767
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.767
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.733
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.767
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.771
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.771
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.748
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.794
OS12G0238000 Oryza sativa OS12G0238000 I 0.794
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.788
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.788
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.794
PGSC0003DMG400018588 Solanum tuberosum PGSC0003DMG400018588 I 0.677
PK12011.1 Cannabis sativa PK12011.1 D 0.691
PK22174.1 Cannabis sativa PK22174.1 I 0.672
Pm005124 Prunus mume Pm005124 I 0.727
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.730
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.730
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.735
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.723
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.728
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.701
Sb09g007370 Sorghum bicolor Sb09g007370 N 0.710
Si021484m.g Setaria italica Si021484m.g I 0.666
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.703
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.696
TCM_047091 Theobroma cacao TCM_047091 I 0.714
Thhalv10012583m.g Eutrema salsugineum Thhalv10012583m.g I 0.687
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.672
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.787
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.804
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.801
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.787
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.758
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.685
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.723