ORGLA03G0178400 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA03G0178400 T276693_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.723 0.798
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.723 0.798
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.723 0.798
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.691 0.766
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.691 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0178400.1 Myb 14 61
ORGLA03G0178400.1 Myb 67 145

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

349 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003477 Ricinus communis 29822.m003477 N
30069.m000440 Ricinus communis 30069.m000440 N
30114.m000507 Ricinus communis 30114.m000507 N
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I
ADAP Arabidopsis thaliana AT1G16060 I
AT1G79700 Arabidopsis thaliana AT1G79700 I
WRI1 Arabidopsis thaliana AT3G54320 I
BGIOSGA017664 Oryza indica BGIOSGA017664 I
BGIOSGA021927 Oryza indica BGIOSGA021927 N
BGIOSGA028751 Oryza indica BGIOSGA028751 I
BGIOSGA030783 Oryza indica BGIOSGA030783 I
BGIOSGA034580 Oryza indica BGIOSGA034580 N
BGIOSGA036704 Oryza indica BGIOSGA036704 N
Bo5g021520 Brassica oleracea Bo5g021520 N
Bo6g067950 Brassica oleracea Bo6g067950 I
Bo6g124080 Brassica oleracea Bo6g124080 N
Bo8g083590 Brassica oleracea Bo8g083590 I
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N
Bra003178 Brassica rapa Bra003178 N
Bra007066 Brassica rapa Bra007066 N
Bra026082 Brassica rapa Bra026082 I
Bra035137 Brassica rapa Bra035137 I
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N
Carubv10010918m.g Capsella rubella Carubv10010918m.g N
Carubv10018845m.g Capsella rubella Carubv10018845m.g I
Carubv10020688m.g Capsella rubella Carubv10020688m.g N
cassava11368.m1 Manihot esculenta cassava11368.m1 N
cassava16315.m1 Manihot esculenta cassava16315.m1 N
cassava39084.m1 Manihot esculenta cassava39084.m1 I
Ca_03306 Cicer arietinum Ca_03306 N
Ca_10533 Cicer arietinum Ca_10533 N
Ca_17532 Cicer arietinum Ca_17532 N
Ca_20689 Cicer arietinum Ca_20689 N
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N
Cla015555 Citrullus lanatus Cla015555 N
Cla017294 Citrullus lanatus Cla017294 N
Cla019044 Citrullus lanatus Cla019044 N
Cla020765 Citrullus lanatus Cla020765 N
Cucsa.106090 Cucumis sativus Cucsa.106090 N
Cucsa.170790 Cucumis sativus Cucsa.170790 I
Cucsa.282940 Cucumis sativus Cucsa.282940 N
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N
F775_02064 Aegilops tauschii F775_02064 N
F775_02400 Aegilops tauschii F775_02400 I
F775_06373 Aegilops tauschii F775_06373 N
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N
GLYMA02G36880 Glycine max GLYMA02G36880 I
GLYMA04G24010 Glycine max GLYMA04G24010 N
GLYMA06G30840 Glycine max GLYMA06G30840 N
GLYMA07G02380 Glycine max GLYMA07G02380 I
GLYMA08G23630 Glycine max GLYMA08G23630 I
GLYMA08G24420 Glycine max GLYMA08G24420 N
GLYMA08G40831 Glycine max GLYMA08G40831 N
GLYMA09G37540 Glycine max GLYMA09G37540 N
GLYMA15G34770 Glycine max GLYMA15G34770 N
GLYMA17G07860 Glycine max GLYMA17G07860 I
GLYMA18G16236 Glycine max GLYMA18G16236 N
GLYMA18G49101 Glycine max GLYMA18G49101 N
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I
GRMZM2G073982 Zea mays GRMZM2G073982 N
GRMZM2G113078 Zea mays GRMZM2G113078 I
GRMZM2G124524 Zea mays GRMZM2G124524 I
GRMZM2G131266 Zea mays GRMZM2G131266 N
GRMZM2G141219 Zea mays GRMZM2G141219 I
GRMZM2G174834 Zea mays GRMZM2G174834 I
GRMZM2G451031 Zea mays GRMZM2G451031 N
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N
LPERR01G30020 Leersia perrieri LPERR01G30020 N
LPERR05G19870 Leersia perrieri LPERR05G19870 I
LPERR08G13500 Leersia perrieri LPERR08G13500 N
LPERR09G07570 Leersia perrieri LPERR09G07570 N
LPERR12G01610 Leersia perrieri LPERR12G01610 N
Lus10001553.g Linum usitatissimum Lus10001553.g N
Lus10005253.g Linum usitatissimum Lus10005253.g N
Lus10008939.g Linum usitatissimum Lus10008939.g N
Lus10013268.g Linum usitatissimum Lus10013268.g N
Lus10024101.g Linum usitatissimum Lus10024101.g I
Lus10028880.g Linum usitatissimum Lus10028880.g N
Lus10030671.g Linum usitatissimum Lus10030671.g N
Lus10030792.g Linum usitatissimum Lus10030792.g N
Lus10036719.g Linum usitatissimum Lus10036719.g I
Lus10037209.g Linum usitatissimum Lus10037209.g I
Lus10041618.g Linum usitatissimum Lus10041618.g I
MDP0000133423 Malus domestica MDP0000133423 N
MDP0000166059 Malus domestica MDP0000166059 N
MDP0000186581 Malus domestica MDP0000186581 N
MDP0000206674 Malus domestica MDP0000206674 N
MDP0000231748 Malus domestica MDP0000231748 N
MDP0000281784 Malus domestica MDP0000281784 I
MDP0000297698 Malus domestica MDP0000297698 N
MDP0000318457 Malus domestica MDP0000318457 N
mg013664m Mimulus guttatus mg013664m N
mgf008907m Mimulus guttatus mgf008907m I
mgf017413m Mimulus guttatus mgf017413m N
mgf019116m Mimulus guttatus mgf019116m N
mgf019814m Mimulus guttatus mgf019814m N
MTR_2g460730 Medicago truncatula MTR_2g460730 N
MTR_4g007770 Medicago truncatula MTR_4g007770 N
MTR_4g130270 Medicago truncatula MTR_4g130270 I
MTR_6g011490 Medicago truncatula MTR_6g011490 N
MTR_7g009410 Medicago truncatula MTR_7g009410 N
MTR_8g044040 Medicago truncatula MTR_8g044040 N
MTR_8g044070 Medicago truncatula MTR_8g044070 N
MTR_8g468920 Medicago truncatula MTR_8g468920 N
OB01G43640 Oryza brachyantha OB01G43640 N
OB05G31600 Oryza brachyantha OB05G31600 I
OB09G17420 Oryza brachyantha OB09G17420 I
OB11G11380 Oryza brachyantha OB11G11380 I
OB12G11690 Oryza brachyantha OB12G11690 I
OBART06G03040 Oryza barthii OBART06G03040 N
OBART09G10730 Oryza barthii OBART09G10730 N
OBART12G01740 Oryza barthii OBART12G01740 N
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N
OLONG_002862 Oryza longistaminata OLONG_002862 N
OLONG_014256 Oryza longistaminata OLONG_014256 I
OMERI01G26790 Oryza meridionalis OMERI01G26790 I
OMERI06G03270 Oryza meridionalis OMERI06G03270 N
OMERI08G13500 Oryza meridionalis OMERI08G13500 N
OMERI09G08520 Oryza meridionalis OMERI09G08520 N
OMERI11G02080 Oryza meridionalis OMERI11G02080 N
OMERI12G00060 Oryza meridionalis OMERI12G00060 N
ONIVA03G39530 Oryza nivara ONIVA03G39530 N
ONIVA06G03970 Oryza nivara ONIVA06G03970 N
ONIVA08G17820 Oryza nivara ONIVA08G17820 N
ONIVA09G10420 Oryza nivara ONIVA09G10420 I
ONIVA11G01800 Oryza nivara ONIVA11G01800 N
OPUNC05G21440 Oryza punctata OPUNC05G21440 I
OPUNC08G14310 Oryza punctata OPUNC08G14310 N
OPUNC09G09320 Oryza punctata OPUNC09G09320 N
OPUNC11G01540 Oryza punctata OPUNC11G01540 N
OPUNC12G01560 Oryza punctata OPUNC12G01560 N
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N
OS05G0536250 Oryza sativa OS05G0536250 I
OS06G0145700 Oryza sativa OS06G0145700 N
OS08G0442400 Oryza sativa OS08G0442400 I
OS09G0423800 Oryza sativa OS09G0423800 I
OS12G0126300 Oryza sativa OS12G0126300 I
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N
Pavir.J02216 Panicum virgatum Pavir.J02216 I
Pavir.J19507 Panicum virgatum Pavir.J19507 N
Pavir.J34675 Panicum virgatum Pavir.J34675 I
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N
PK04008.1 Cannabis sativa PK04008.1 I
PK24809.1 Cannabis sativa PK24809.1 I
PK26651.1 Cannabis sativa PK26651.1 I
Pm006561 Prunus mume Pm006561 N
Pm008629 Prunus mume Pm008629 I
Pm013856 Prunus mume Pm013856 N
Pm015843 Prunus mume Pm015843 N
Pm015847 Prunus mume Pm015847 N
Pm017032 Prunus mume Pm017032 N
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I
Sb02g025080 Sorghum bicolor Sb02g025080 I
Sb03g037750 Sorghum bicolor Sb03g037750 N
Sb05g001790 Sorghum bicolor Sb05g001790 I
Sb07g021800 Sorghum bicolor Sb07g021800 N
Sb09g026800 Sorghum bicolor Sb09g026800 I
Sb10g003160 Sorghum bicolor Sb10g003160 N
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N
Si007857m.g Setaria italica Si007857m.g N
Si012026m.g Setaria italica Si012026m.g N
Si013842m.g Setaria italica Si013842m.g N
Si022186m.g Setaria italica Si022186m.g I
Si026433m.g Setaria italica Si026433m.g N
Si030129m.g Setaria italica Si030129m.g I
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N
TCM_011797 Theobroma cacao TCM_011797 N
TCM_018386 Theobroma cacao TCM_018386 N
TCM_027569 Theobroma cacao TCM_027569 I
TCM_038442 Theobroma cacao TCM_038442 N
TCM_044588 Theobroma cacao TCM_044588 I
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N
TRIUR3_01982 Triticum urartu TRIUR3_01982 I
TRIUR3_24036 Triticum urartu TRIUR3_24036 N
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N
WRI1 Vitis vinifera VIT_13s0047g00340 N
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N