Ca_07482 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_07482 T282970_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.749 0.839
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.749 0.839
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.668 0.731
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.668 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_07482 Myb 19 65
Ca_07482 Myb 71 116

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29820.m001008 Ricinus communis 29820.m001008 I 0.000
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bra005852 Brassica rapa Bra005852 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.000
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.000
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.000
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.000
TCM_021596 Theobroma cacao TCM_021596 I 0.000
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.000