SPU_004723 (Strongylocentrotus purpuratus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 SPU_004723 T306036_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERR
M03941_2.00 		Drosophila melanogaster
BSAAGGTCRH
DYGACCTTSV		 SELEX
Nitta et al.(2015)
ERR_1 		0.920 0.729
ERR
M06433_2.00 		Drosophila melanogaster
MAAGGTCA
TGACCTTK		 B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849 		0.920 0.729
Hr39
M03942_2.00 		Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG		 SELEX
Nitta et al.(2015)
Hr39_1 		0.895 0.529
Hr39
M03943_2.00 		Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG		 SELEX
Nitta et al.(2015)
Hr39_2 		0.895 0.529
Esrrg
M00817_2.00 		Mus musculus
VAAGGTCA
TGACCTTB		 PBM
Weirauch et al.(2013)
pTH3841 		0.892 0.700
ESRRB
M03367_2.00 		Homo sapiens
TCAAGGTCAWH
DWTGACCTTGA		 SELEX
Jolma et al.(2013)
ESRRB_1 		0.892 0.700
ESRRG
M03412_2.00 		Homo sapiens
AAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTT		 SELEX
Jolma et al.(2013)
ESRRG_1 		0.892 0.700
ESRRG
M03413_2.00 		Homo sapiens
AAGGTCANHCAAGGTCA
TGACCTTGDNTGACCTT		 SELEX
Jolma et al.(2013)
ESRRG_2 		0.892 0.700
ESRRG
M03414_2.00 		Homo sapiens
YSAAGGTCAH
DTGACCTTSR		 SELEX
Jolma et al.(2013)
ESRRG_3 		0.892 0.700
ESRRB
M05595_2.00 		Homo sapiens
BBSAAGGTCRH
DYGACCTTSVV		 SELEX
Yin et al.(2017)
ESRRB_eDBD_HT-SELEX 		0.892 0.700
ESRRG
M05673_2.00 		Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRG_eDBD_HT-SELEX 		0.892 0.700
ESRRG
M05675_2.00 		Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRG_FL_HT-SELEX 		0.892 0.700
Esrrb
M08034_2.00 		Mus musculus
NNBYCAAGGTCANNB
VNNTGACCTTGRVNN		 ChIP-seq
Chen et al.(2011)
SRP000217_Esrrb 		0.892 0.700
ESRRB
M09272_2.00 		Homo sapiens
BCAAGGTCA
TGACCTTGV		 Misc
Kulakovskiy et al.(2013)
ERR2_HUMAN.H11MO.0.A 		0.892 0.700
ESRRG
M09296_2.00 		Homo sapiens
TCAAGGTCA
TGACCTTGA		 Misc
Kulakovskiy et al.(2013)
ERR3_HUMAN.H11MO.0.B 		0.892 0.700
Esrrb
M09312_2.00 		Mus musculus
NHDBTCAAGGTCANNBN
NVNNTGACCTTGAVHDN		 Misc
Kulakovskiy et al.(2013)
ERR2_MOUSE.H11MO.0.A 		0.892 0.700
Esrrg
M09321_2.00 		Mus musculus
BSAAGGWCAB
VTGWCCTTSV		 Misc
Kulakovskiy et al.(2013)
ERR3_MOUSE.H11MO.0.C 		0.892 0.700
ESRRB
M11129_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR2_01 		0.892 0.700
ESRRB
M11130_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR2_Q2 		0.892 0.700
ESRRB
M11131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR2_Q3 		0.892 0.700
ESRRG
M11185_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR3_Q2_01 		0.892 0.700
ESRRG
M11186_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR3_Q2 		0.892 0.700
ESRRB
M05596_2.00 		Homo sapiens
NNSAAGGTCRH
DYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRB_eDBD_Methyl-HT-SELEX 		0.892 0.700
ESRRG
M05674_2.00 		Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRG_eDBD_Methyl-HT-SELEX 		0.892 0.700
ESRRG
M05676_2.00 		Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRG_FL_Methyl-HT-SELEX 		0.892 0.700
Esrra
M00183_2.00 		Mus musculus
VAAGGTCAH
DTGACCTTB		 PBM
Badis et al.(2009)
Esrra_2190 		0.890 0.686
ESRRA
M03397_2.00 		Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN		 SELEX
Jolma et al.(2013)
ESRRA_1 		0.890 0.686
ESRRA
M03398_2.00 		Homo sapiens
AAGGTCAWHCAAGGTCA
TGACCTTGDWTGACCTT		 SELEX
Jolma et al.(2013)
ESRRA_2 		0.890 0.686
ESRRA
M03399_2.00 		Homo sapiens
SAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTS		 SELEX
Jolma et al.(2013)
ESRRA_3 		0.890 0.686
ESRRA
M03400_2.00 		Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN		 SELEX
Jolma et al.(2013)
ESRRA_4 		0.890 0.686
ESRRA
M03401_2.00 		Homo sapiens
RAGGTCABNCAAGGTCA
TGACCTTGNVTGACCTY		 SELEX
Jolma et al.(2013)
ESRRA_5 		0.890 0.686
ESRRA
M03402_2.00 		Homo sapiens
VAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTB		 SELEX
Jolma et al.(2013)
ESRRA_6 		0.890 0.686
Esrra
M03430_2.00 		Mus musculus
DAGGTYAKTMAAGGTCA
TGACCTTKAMTRACCTH		 SELEX
Jolma et al.(2013)
Esrra_1 		0.890 0.686
Esrra
M03431_2.00 		Mus musculus
KTCAAGGTCAT
ATGACCTTGAM		 SELEX
Jolma et al.(2013)
Esrra_2 		0.890 0.686
ESRRA
M05655_2.00 		Homo sapiens
NNSAAGGTCAN
NTGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRA_eDBD_HT-SELEX 		0.890 0.686
ESRRA
M05657_2.00 		Homo sapiens
NNSAAGGTCAH
DTGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRA_FL_HT-SELEX 		0.890 0.686
ESRRA
M07988_2.00 		Homo sapiens
RGGKCASMNTGMCCY
RGGKCANKSTGMCCY		 ChIP-seq
Gerstein et al.(2012)
ECC-1_ERALPHA_HudsonAlpha 		0.890 0.686
ESRRA
M07989_2.00 		Homo sapiens
NNRGGTCABNNTGHCCYNN
NNRGGDCANNVTGACCYNN		 ChIP-seq
Gerstein et al.(2012)
T-47D_ERALPHA_HudsonAlpha 		0.890 0.686
ESRRA
M09290_2.00 		Homo sapiens
BYSAAGGTCANNNNN
NNNNNTGACCTTSRV		 Misc
Kulakovskiy et al.(2013)
ERR1_HUMAN.H11MO.0.A 		0.890 0.686
Esrra
M09319_2.00 		Mus musculus
NNBYCAAGGTCA
TGACCTTGRVNN		 Misc
Kulakovskiy et al.(2013)
ERR1_MOUSE.H11MO.0.A 		0.890 0.686
ESRRA
M11168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR1_Q2_01 		0.890 0.686
ESRRA
M11169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR1_Q2 		0.890 0.686
ESRRA
M11170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERR1_Q3 		0.890 0.686
ESRRA
M11171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESRRA_10 		0.890 0.686
ESRRA
M05656_2.00 		Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN		 SELEX
Yin et al.(2017)
ESRRA_eDBD_Methyl-HT-SELEX 		0.890 0.686
ESRRA
M05658_2.00 		Homo sapiens
NBSAAGGTCRH
DYGACCTTSVN		 SELEX
Yin et al.(2017)
ESRRA_FL_Methyl-HT-SELEX 		0.890 0.686
nhr-25
M08226_2.00 		Caenorhabditis elegans
MAAGGTCA
TGACCTTK		 ChIP-seq
Contrino et al.(2012)
Mw160 		0.863 0.543
NR5A1
M05613_2.00 		Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN		 SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX 		0.828 0.543
Nr5a1
M09322_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B 		0.828 0.543
NR5A1
M11142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5_01 		0.828 0.543
NR5A1
M11143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5 		0.828 0.543
NR5A1
M11144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6_01 		0.828 0.543
NR5A1
M11145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6 		0.828 0.543
NR5A1
M05614_2.00 		Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN		 SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX 		0.828 0.543
NR5A2
M05589_2.00 		Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1 		0.825 0.543
NR5A2
M05590_2.00 		Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2 		0.825 0.543
NR5A2
M05591_2.00 		Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3 		0.825 0.543
NR5A2
M09271_2.00 		Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B 		0.825 0.543
NR5A2
M11126_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5_01 		0.825 0.543
NR5A2
M11127_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5 		0.825 0.543
NR5A2
M11128_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q6 		0.825 0.543
NR5A2
M05592_2.00 		Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1 		0.825 0.543
NR5A2
M05593_2.00 		Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2 		0.825 0.543
NR5A2
M05594_2.00 		Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3 		0.825 0.543
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.823 0.529
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.823 0.529
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.823 0.529
Nr5a2
M00816_2.00 		Mus musculus
VAAGGTCR
YGACCTTB		 PBM
Weirauch et al.(2013)
pTH3468 		0.804 0.529
Nr5a2
M08158_2.00 		Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB		 ChIP-seq
Mathelier et al.(2014)
MA0505.1 		0.804 0.529
Nr5a2
M09320_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A 		0.804 0.529
Nr5a2
M09616_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295 		0.804 0.529
Nr5a2
M09615_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019 		0.804 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_004723-tr Nuclear receptor 79 148

Links

Other Nuclear receptor family TFs
Other Strongylocentrotus purpuratus TFs

590 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY67 Arabidopsis thaliana AT1G66550 I
WRKY64 Arabidopsis thaliana AT1G66560 I
WRKY63 Arabidopsis thaliana AT1G66600 D
WRKY66 Arabidopsis thaliana AT1G80590 I
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY38 Arabidopsis thaliana AT5G22570 D
BGIOSGA004703 Oryza indica BGIOSGA004703 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA030113 Oryza indica BGIOSGA030113 I
BGIOSGA030346 Oryza indica BGIOSGA030346 I
Bo01002s040 Brassica oleracea Bo01002s040 I
Bo2g024040 Brassica oleracea Bo2g024040 I
Bo2g095820 Brassica oleracea Bo2g095820 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I
Bra002421 Brassica rapa Bra002421 I
Bra008454 Brassica rapa Bra008454 I
Bra008456 Brassica rapa Bra008456 I
Bra008459 Brassica rapa Bra008459 I
Bra020196 Brassica rapa Bra020196 I
Bra020197 Brassica rapa Bra020197 I
Bra023211 Brassica rapa Bra023211 I
Bra028918 Brassica rapa Bra028918 I
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I
Carubv10002472m.g Capsella rubella Carubv10002472m.g I
Carubv10012720m.g Capsella rubella Carubv10012720m.g I
Carubv10021420m.g Capsella rubella Carubv10021420m.g I
Carubv10021860m.g Capsella rubella Carubv10021860m.g I
Carubv10021899m.g Capsella rubella Carubv10021899m.g I
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
Carubv10022162m.g Capsella rubella Carubv10022162m.g I
Ca_18932 Cicer arietinum Ca_18932 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
F775_03183 Aegilops tauschii F775_03183 N
F775_22564 Aegilops tauschii F775_22564 I
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I
GRMZM2G029292 Zea mays GRMZM2G029292 I
GRMZM2G158328 Zea mays GRMZM2G158328 I
GRMZM2G382350 Zea mays GRMZM2G382350 I
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR11G00960 Leersia perrieri LPERR11G00960 I
mgf002542m Mimulus guttatus mgf002542m I
MLOC_22356 Hordeum vulgare MLOC_22356 I
MLOC_6114 Hordeum vulgare MLOC_6114 I
MTR_5g067680 Medicago truncatula MTR_5g067680 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
OB05G17240 Oryza brachyantha OB05G17240 I
OB05G27830 Oryza brachyantha OB05G27830 I
OB05G27850 Oryza brachyantha OB05G27850 I
OBART05G20340 Oryza barthii OBART05G20340 I
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OLONG_002978 Oryza longistaminata OLONG_002978 I
OLONG_027124 Oryza longistaminata OLONG_027124 I
OMERI05G18170 Oryza meridionalis OMERI05G18170 I
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI05G18260 Oryza meridionalis OMERI05G18260 I
ONIVA01G40340 Oryza nivara ONIVA01G40340 I
ONIVA05G21440 Oryza nivara ONIVA05G21440 I
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA09G03360 Oryza nivara ONIVA09G03360 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC05G18000 Oryza punctata OPUNC05G18000 I
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
OS01G0820700 Oryza sativa OS01G0820700 I
OS05G0478400 Oryza sativa OS05G0478400 I
OS05G0478800 Oryza sativa OS05G0478800 I
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.J31756 Panicum virgatum Pavir.J31756 I
Pavir.J39511 Panicum virgatum Pavir.J39511 I
Sb03g038170 Sorghum bicolor Sb03g038170 I
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
Si004791m.g Setaria italica Si004791m.g I
Si012735m.g Setaria italica Si012735m.g I
TCM_019689 Theobroma cacao TCM_019689 I
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I
Traes_3B_8B0D448D8 Triticum aestivum Traes_3B_8B0D448D8 I
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I
TRIUR3_27575 Triticum urartu TRIUR3_27575 I
TRIUR3_33054 Triticum urartu TRIUR3_33054 I
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I