MDOA002495 (Musca domestica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MDOA002495 T307831_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.985 0.971
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.985 0.971
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.979 0.871
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.977 0.857
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.977 0.857
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.977 0.857
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.971 0.829
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.971 0.829
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.971 0.829
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.971 0.829
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.971 0.829
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.971 0.829
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.971 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDOA002495-PA Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Musca domestica TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH104 Arabidopsis thaliana AT4G14410 D 0.000
Bo1g102270 Brassica oleracea Bo1g102270 I 0.000
Bo4g126940 Brassica oleracea Bo4g126940 I 0.000
Bo7g040830 Brassica oleracea Bo7g040830 I 0.000
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.000
Bra014923 Brassica rapa Bra014923 I 0.000
Bra041033 Brassica rapa Bra041033 I 0.000
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.000
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.000
cassava35418.valid.m1 Manihot esculenta cassava35418.valid.m1 N 0.000
Ca_23174 Cicer arietinum Ca_23174 I 0.000
Cla021854 Citrullus lanatus Cla021854 I 0.000
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.000
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N 0.000
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.000
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.000
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.000
Lus10021199.g Linum usitatissimum Lus10021199.g N 0.000
Lus10021876.g Linum usitatissimum Lus10021876.g N 0.000
Lus10041148.g Linum usitatissimum Lus10041148.g N 0.000
MTR_1g043430 Medicago truncatula MTR_1g043430 I 0.000
POPTR_0008s16560 Populus trichocarpa POPTR_0008s16560 N 0.000
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N 0.000
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.000
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N 0.000
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N 0.000
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.000