nRc.2.0.1.g06588 (Romanomermis culicivorax)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nRc.2.0.1.g06588 T309882_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.812 0.887
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.812 0.887
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.812 0.887
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.812 0.887
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.812 0.887
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t06588-RA Nuclear receptor 11 72

Links

Other Nuclear receptor family TFs
Other Romanomermis culicivorax TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIS002444 Anopheles sinensis ASIS002444 N 0.000
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.000
Bra012832 Brassica rapa Bra012832 N 0.000
Ca_10726 Cicer arietinum Ca_10726 N 0.000
Cla010647 Citrullus lanatus Cla010647 N 0.000
CLEC004367 Cimex lectularius CLEC004367 N 0.000
CRE07740 Caenorhabditis remanei CRE07740 N 0.000
D917_04157 Trichinella nativa D917_04157 N 0.000
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.000
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.000
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.000
HelroG178674 Helobdella robusta HelroG178674 N 0.000
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.000
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.000
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.000
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.000
MDP0000699531 Malus domestica MDP0000699531 N 0.000
OBART09G18880 Oryza barthii OBART09G18880 N 0.000
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.000
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.000
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.000
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.000
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.000
Pm010381 Prunus mume Pm010381 N 0.000
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.000
TCM_042534 Theobroma cacao TCM_042534 I 0.000
TriadG58720 Trichoplax adhaerens TriadG58720 N 0.000
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.000