ENSPMAG00000001401 (Petromyzon marinus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSPMAG00000001401 T317433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.774 0.774
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.774 0.774
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.774 0.774
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.774 0.774
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.774 0.774
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.774 0.774
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.774 0.774
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.774 0.774
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.774 0.774
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.774 0.774
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.774 0.774
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.750 0.750
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.750 0.750
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.750 0.750
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.738 0.738
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.738 0.738
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.738 0.738
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.738 0.738
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.738 0.738
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.738 0.738
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.738 0.738
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.738 0.738
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.738 0.738
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.738 0.738
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.738 0.738
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.738 0.738
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.738 0.738
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.738 0.738
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.738 0.738
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.738 0.738
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.738 0.738
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.738 0.738
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.738 0.738
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.738 0.738
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.726 0.726
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.726 0.726
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.726 0.726
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.726 0.726
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.726 0.726
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.726 0.726
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.726 0.726
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.726 0.726
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.726 0.726
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.726 0.726
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.726 0.726
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.726 0.726
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.726 0.726
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.726 0.726
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.726 0.726
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000001549 Rel 198 300

Links

Other Rel family TFs
Other Petromyzon marinus TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006403 Ricinus communis 30169.m006403 I
BHLH128 Arabidopsis thaliana AT1G05805 I
AT2G42280 Arabidopsis thaliana AT2G42280 D
BGIOSGA004992 Oryza indica BGIOSGA004992 I
BGIOSGA008576 Oryza indica BGIOSGA008576 I
BGIOSGA016651 Oryza indica BGIOSGA016651 I
Bo4g015860 Brassica oleracea Bo4g015860 I
Bo5g006980 Brassica oleracea Bo5g006980 I
Bo5g007030 Brassica oleracea Bo5g007030 I
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I
Bra004678 Brassica rapa Bra004678 I
Bra015456 Brassica rapa Bra015456 I
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I
Carubv10009382m.g Capsella rubella Carubv10009382m.g I
Carubv10023498m.g Capsella rubella Carubv10023498m.g I
Ca_07284 Cicer arietinum Ca_07284 I
Ca_14007 Cicer arietinum Ca_14007 I
Ca_18899 Cicer arietinum Ca_18899 I
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I
Cla006394 Citrullus lanatus Cla006394 I
Cucsa.094340 Cucumis sativus Cucsa.094340 I
Cucsa.143260 Cucumis sativus Cucsa.143260 I
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I
F775_24576 Aegilops tauschii F775_24576 I
F775_26506 Aegilops tauschii F775_26506 I
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I
GRMZM2G114873 Zea mays GRMZM2G114873 I
GRMZM2G142932 Zea mays GRMZM2G142932 I
GRMZM2G153454 Zea mays GRMZM2G153454 I
GRMZM2G437481 Zea mays GRMZM2G437481 I
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I
LPERR01G35240 Leersia perrieri LPERR01G35240 I
LPERR02G18900 Leersia perrieri LPERR02G18900 I
LPERR04G13560 Leersia perrieri LPERR04G13560 I
LPERR08G16800 Leersia perrieri LPERR08G16800 I
LPERR09G10800 Leersia perrieri LPERR09G10800 I
Lus10025518.g Linum usitatissimum Lus10025518.g I
Lus10026733.g Linum usitatissimum Lus10026733.g I
MDP0000307685 Malus domestica MDP0000307685 I
mgf016092m Mimulus guttatus mgf016092m I
MLOC_12058 Hordeum vulgare MLOC_12058 I
MLOC_20318 Hordeum vulgare MLOC_20318 I
MLOC_30102 Hordeum vulgare MLOC_30102 I
MTR_1g052470 Medicago truncatula MTR_1g052470 I
MTR_1g116790 Medicago truncatula MTR_1g116790 I
MTR_4g065870 Medicago truncatula MTR_4g065870 I
MTR_7g092540 Medicago truncatula MTR_7g092540 I
OB01G49420 Oryza brachyantha OB01G49420 I
OB02G30670 Oryza brachyantha OB02G30670 I
OB04G24170 Oryza brachyantha OB04G24170 I
OBART01G40680 Oryza barthii OBART01G40680 I
OBART02G23210 Oryza barthii OBART02G23210 I
OBART04G16900 Oryza barthii OBART04G16900 I
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I
OLONG_004619 Oryza longistaminata OLONG_004619 I
OLONG_009256 Oryza longistaminata OLONG_009256 I
OMERI01G37660 Oryza meridionalis OMERI01G37660 I
OMERI02G22740 Oryza meridionalis OMERI02G22740 I
OMERI04G14260 Oryza meridionalis OMERI04G14260 I
ONIVA01G45730 Oryza nivara ONIVA01G45730 I
ONIVA02G26110 Oryza nivara ONIVA02G26110 I
ONIVA04G15000 Oryza nivara ONIVA04G15000 I
OPUNC01G39450 Oryza punctata OPUNC01G39450 I
OPUNC02G21170 Oryza punctata OPUNC02G21170 I
OPUNC04G14700 Oryza punctata OPUNC04G14700 I
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I
OS01G0900800 Oryza sativa OS01G0900800 I
OS04G0489600 Oryza sativa OS04G0489600 I
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I
Pavir.J01306 Panicum virgatum Pavir.J01306 I
Pavir.J08536 Panicum virgatum Pavir.J08536 I
Pavir.J25484 Panicum virgatum Pavir.J25484 I
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I
Sb03g042860 Sorghum bicolor Sb03g042860 I
Sb04g025260 Sorghum bicolor Sb04g025260 I
Sb06g020810 Sorghum bicolor Sb06g020810 I
Sb07g027810 Sorghum bicolor Sb07g027810 I
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I
Si001123m.g Setaria italica Si001123m.g I
Si010513m.g Setaria italica Si010513m.g I
Si013950m.g Setaria italica Si013950m.g I
Si030166m.g Setaria italica Si030166m.g I
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I
TRIUR3_16394 Triticum urartu TRIUR3_16394 I
TRIUR3_33816 Triticum urartu TRIUR3_33816 I
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I