CRE28315 (Caenorhabditis remanei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CRE28315 T327251_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CRE28315 Sox 65 134

Links

Other Sox family TFs
Other Caenorhabditis remanei TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP19638 Atta cephalotes ACEP19638 I 0.431
AEPI010254 Anopheles epiroticus AEPI010254 N 0.424
AFUN005717 Anopheles funestus AFUN005717 N 0.442
AMAM014030 Anopheles maculatus AMAM014030 N 0.424
AMIN005634 Anopheles minimus AMIN005634 N 0.424
ASIM_0000224701 Anisakis simplex ASIM_0000224701 N 0.421
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.475
ASU_00939 Ascaris suum ASU_00939 N 0.469
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.502
Bm2393 Brugia malayi Bm2393 N 0.475
Bm7765 Brugia malayi Bm7765 N 0.423
Bm9369 Brugia malayi Bm9369 N 0.423
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.442
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.423
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.501
CBG11867 Caenorhabditis briggsae CBG11867 N 0.416
CBG18873 Caenorhabditis briggsae CBG18873 N 0.518
CBN07735 Caenorhabditis brenneri CBN07735 N 0.416
CBN15844 Caenorhabditis brenneri CBN15844 N 0.546
CBN31697 Caenorhabditis brenneri CBN31697 N 0.416
CJA17191 Caenorhabditis japonica CJA17191 N 0.561
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.424
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.424
CRE14258 Caenorhabditis remanei CRE14258 N 0.416
D917_05046 Trichinella nativa D917_05046 N 0.482
D917_05048 Trichinella nativa D917_05048 N 0.482
D918_03887 Trichuris suis D918_03887 N 0.424
D918_05288 Trichuris suis D918_05288 N 0.480
D918_06015 Trichuris suis D918_06015 N 0.482
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.514
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.434
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.423
EFV52201 Trichinella spiralis EFV52201 N 0.424
EFV56090 Trichinella spiralis EFV56090 N 0.482
EFV56095 Trichinella spiralis EFV56095 N 0.482
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.453
pbrm1l Danio rerio ENSDARG00000077038 N 0.453
ENSPFOG00000017300 Poecilia formosa ENSPFOG00000017300 N 0.453
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.440
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.440
ENSXMAG00000016160 Xiphophorus maculatus ENSXMAG00000016160 N 0.453
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.475
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.433
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.475
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.514
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.432
ISCW005293 Ixodes scapularis ISCW005293 N 0.468
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.485
L798_00437 Zootermopsis nevadensis L798_00437 N 0.424
L892_g13433 Steinernema scapterisci L892_g13433 I 0.485
LOAG_11340 Loa loa LOAG_11340 N 0.423
LOAG_15875 Loa loa LOAG_15875 N 0.475
mgf006762m Mimulus guttatus mgf006762m N 0.450
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.501
Minc18174 Meloidogyne incognita Minc18174 N 0.433
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.423
NBR_0000051501 Nippostrongylus brasiliensis NBR_0000051501 N 0.432
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.423
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.475
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.475
NECAME_06830 Necator americanus NECAME_06830 N 0.482
NEMVEDRAFT_v1g127783 Nematostella vectensis NEMVEDRAFT_v1g127783 N 0.420
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.423
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.475
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.423
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.475
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.423
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.452
PHUM393920 Pediculus humanus PHUM393920 N 0.424
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.425
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.418
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.517
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.457
SMAR009325 Strigamia maritima SMAR009325 N 0.468
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.475
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.500
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.425
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.429
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.432
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.455
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.425
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.482
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.485
TCM_014800 Theobroma cacao TCM_014800 N 0.450
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.470
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.470
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.486
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.486
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.459
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.480
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.476
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.416
hmg-6 Caenorhabditis elegans WBGene00009827 N 0.509
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.475
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.423
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.475
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.423