Afo_R012388 (Aptenodytes forsteri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Afo_R012388 T333543_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R012388 Sox 1 29

Links

Other Sox family TFs
Other Aptenodytes forsteri TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
67303 Aureococcus anophagefferens 67303 N 0.548
AAEL000771 Aedes aegypti AAEL000771 N 0.603
AALB009772 Anopheles albimanus AALB009772 N 0.528
AALB009867 Anopheles albimanus AALB009867 N 0.643
Aan_R006397 Calypte anna Aan_R006397 N 0.496
AATE015714 Anopheles atroparvus AATE015714 N 0.528
AATE016483 Anopheles atroparvus AATE016483 N 0.635
ACEP10857 Atta cephalotes ACEP10857 N 0.468
ACEP25851 Atta cephalotes ACEP25851 N 0.528
ACOM022799 Anopheles coluzzii ACOM022799 N 0.643
ACOM026653 Anopheles coluzzii ACOM026653 N 0.528
ACUA008827 Anopheles culicifacies ACUA008827 N 0.635
ACUA010594 Anopheles culicifacies ACUA010594 N 0.643
ACUA012732 Anopheles culicifacies ACUA012732 N 0.603
ADIR005631 Anopheles dirus ADIR005631 N 0.567
ADIR009661 Anopheles dirus ADIR009661 N 0.528
AEPI003629 Anopheles epiroticus AEPI003629 N 0.643
AEPI007652 Anopheles epiroticus AEPI007652 N 0.635
AEPI007948 Anopheles epiroticus AEPI007948 N 0.603
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.420
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.546
AFUN006689 Anopheles funestus AFUN006689 N 0.682
AFUN009317 Anopheles funestus AFUN009317 N 0.603
AFUN010198 Anopheles funestus AFUN010198 N 0.643
AGAP028091 Anopheles gambiae AGAP028091 N 0.603
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.643
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.632
AMAM004028 Anopheles maculatus AMAM004028 N 0.684
AMAM023617 Anopheles maculatus AMAM023617 N 0.603
AMEC007393 Anopheles melas AMEC007393 N 0.684
AMEC011653 Anopheles melas AMEC011653 N 0.603
AMEM002834 Anopheles merus AMEM002834 N 0.603
AMEM007694 Anopheles merus AMEM007694 N 0.548
AMIN001220 Anopheles minimus AMIN001220 N 0.684
AMIN009302 Anopheles minimus AMIN009302 N 0.643
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.554
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.643
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.528
ASIS001889 Anopheles sinensis ASIS001889 N 0.509
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.603
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.567
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.643
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.603
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.450
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.420
Cla016375 Citrullus lanatus Cla016375 N 0.510
CLEC006960 Cimex lectularius CLEC006960 N 0.643
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.741
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.643
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.509
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.682
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.643
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.509
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.682
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.688
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.514
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.454
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.438
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.640
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.739
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.420
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.677
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.732
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.686
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.739
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.481
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.671
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.677
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.483
SOX8 Equus caballus ENSECAG00000016320 I 0.417
SOX18 Echinops telfairi ENSETEG00000001816 N 0.455
SOX10 Echinops telfairi ENSETEG00000012633 I 0.735
SOX8 Echinops telfairi ENSETEG00000015470 N 0.741
SOX9 Echinops telfairi ENSETEG00000020237 I 0.735
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.496
SOX8 Felis catus ENSFCAG00000004219 N 0.739
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.732
SOX2 Felis catus ENSFCAG00000029205 I 0.574
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.423
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.420
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.677
SOX8 Microcebus murinus ENSMICG00000011516 I 0.741
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.732
Hmg20b Mus musculus ENSMUSG00000020232 D 0.563
Sox17 Mus musculus ENSMUSG00000025902 D 0.671
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.525
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.539
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.649
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.515
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.732
SOX2 Procavia capensis ENSPCAG00000003690 I 0.574
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.455
SOX18 Procavia capensis ENSPCAG00000015663 N 0.684
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.511
ENSPSIG00000007448 Pelodiscus sinensis ENSPSIG00000007448 I 0.153
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.489
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.677
BBX Sorex araneus ENSSARG00000008353 N 0.477
SOX17 Sorex araneus ENSSARG00000009573 I 0.677
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.732
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.732
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.679
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.698
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.741
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.445
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.668
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.455
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.483
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.508
F443_09320 Phytophthora parasitica F443_09320 N 0.485
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.423
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.477
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.477
Gfo_R006305 Geospiza fortis Gfo_R006305 I 0.313
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.496
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.465
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.544
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.430
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.447
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.442
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.498
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.451
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.553
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.460
HelroG68905 Helobdella robusta HelroG68905 N 0.510
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.694
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.528
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.507
HMEL013676 Heliconius melpomene HMEL013676 N 0.660
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.534
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.451
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.428
ISCW001638 Ixodes scapularis ISCW001638 N 0.657
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.498
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.441
L798_00185 Zootermopsis nevadensis L798_00185 N 0.579
L798_05432 Zootermopsis nevadensis L798_05432 N 0.505
L798_12046 Zootermopsis nevadensis L798_12046 N 0.643
L898_g4879 Steinernema monticolum L898_g4879 N 0.698
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.441
LCUP001586 Lucilia cuprina LCUP001586 N 0.453
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.643
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.701
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.442
LotgiG143673 Lottia gigantea LotgiG143673 N 0.714
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.512
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.491
MESCA006364 Megaselia scalaris MESCA006364 N 0.525
MESCA012239 Megaselia scalaris MESCA012239 I 0.494
Minc18937 Meloidogyne incognita Minc18937 N 0.515
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.593
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.538
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.531
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.554
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.741
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.460
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.671
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.517
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.717
PHUM433280 Pediculus humanus PHUM433280 N 0.603
Phyra76615 Phytophthora ramorum Phyra76615 N 0.477
Physo127875 Phytophthora sojae Physo127875 N 0.477
PK00252.1 Cannabis sativa PK00252.1 N 0.585
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.441
PPA11045 Pristionchus pacificus PPA11045 N 0.420
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.418
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.506
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.586
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.586
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.445
RPRC001038 Rhodnius prolixus RPRC001038 N 0.497
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.447
SINV16572 Solenopsis invicta SINV16572 N 0.603
SINV19749 Solenopsis invicta SINV19749 N 0.582
SINV24165 Solenopsis invicta SINV24165 N 0.470
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.445
SMAR007058 Strigamia maritima SMAR007058 N 0.705
SMAR010125 Strigamia maritima SMAR010125 N 0.536
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.455
TC009856 Tribolium castaneum TC009856 N 0.603
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.498
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.460
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.439
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.481
UCREL1_237 Eutypa lata UCREL1_237 N 0.511
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.445
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.445
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.458
sox-2 Caenorhabditis elegans WBGene00004949 I 0.460
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.570
sox8 Xenopus tropicalis XB-GENE-480865 I 0.153
yakG000714 Bos grunniens yakG000714 N 0.429
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.703
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.545
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.509