Aquca_002_00505 (Aquilegia coerulea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Aquca_002_00505 T334364_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.450 0.507
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.450 0.507
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.443 0.522
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.443 0.522
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_002_00505.1 Sox 555 623
Aquca_002_00505.2 Sox 554 622

Links

Other Sox family TFs
Other Aquilegia coerulea TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.443
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.443
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.450
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.450
29822.m003476 Ricinus communis 29822.m003476 I 0.612
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.443
A1O5_02172 Cladophialophora psammophila A1O5_02172 I 0.420
A1O7_07623 Cladophialophora yegresii A1O7_07623 I 0.420
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.443
AB01906.1 Alternaria brassicicola AB01906.1 I 0.420
ACRE_009770 Acremonium chrysogenum ACRE_009770 I 0.420
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.443
HMGB5 Arabidopsis lyrata Al_scaffold_0007_498 I 0.420
AMTR_s00078p00107740 Amborella trichopoda AMTR_s00078p00107740 I 0.594
AOL_s00043g650 Arthrobotrys oligospora AOL_s00043g650 I 0.434
SSRP1 Arabidopsis thaliana AT3G28730 I 0.506
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.472
AWRI1499_3752 Brettanomyces bruxellensis AWRI1499_3752 I 0.442
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I 0.466
BBA_04234 Beauveria bassiana BBA_04234 I 0.420
Bcin11g05240 Botrytis cinerea Bcin11g05240 I 0.422
BDDG_06343 Blastomyces dermatitidis BDDG_06343 I 0.426
BN7_5566 Wickerhamomyces ciferrii BN7_5566 I 0.472
Bo7g091510 Brassica oleracea Bo7g091510 N 0.429
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.476
Bostr.7867s1415 Boechera stricta Bostr.7867s1415 I 0.420
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.492
Bra025350 Brassica rapa Bra025350 N 0.429
Bra033055 Brassica rapa Bra033055 N 0.522
ACLA_039500 Aspergillus clavatus CADACLAG00003509 I 0.426
CADAFLAG00002475 Aspergillus flavus CADAFLAG00002475 I 0.428
AFUA_3G11610 Aspergillus fumigatus CADAFUAG00005351 I 0.426
CADANGAG00002256 Aspergillus niger CADANGAG00002256 I 0.420
ANIA_02885 Aspergillus nidulans CADANIAG00010204 I 0.459
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.426
NFIA_065700 Neosartorya fischeri CADNFIAG00006255 I 0.426
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.431
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.506
CANTEDRAFT_110112 Candida tenuis CANTEDRAFT_110112 I 0.505
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.506
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.604
Ca_10804 Cicer arietinum Ca_10804 I 0.517
Ca_12487 Cicer arietinum Ca_12487 I 0.517
CCM_02275 Cordyceps militaris CCM_02275 I 0.426
CD36_41610 Candida dubliniensis CD36_41610 I 0.464
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N 0.479
CHLREDRAFT_189879 Chlamydomonas reinhardtii CHLREDRAFT_189879 N 0.470
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.523
Ciclev10011266m.g Citrus clementina Ciclev10011266m.g I 0.514
CIMG_03667 Coccidioides immitis CIMG_03667 I 0.420
Cla017295 Citrullus lanatus Cla017295 I 0.507
CMQ_4428 Grosmannia clavigera CMQ_4428 I 0.422
CNF04730 Cryptococcus neoformans CNF04730 I 0.437
COCC4DRAFT_60919 Bipolaris maydis COCC4DRAFT_60919 I 0.420
COCCADRAFT_86510 Bipolaris zeicola COCCADRAFT_86510 I 0.420
COCMIDRAFT_90970 Bipolaris oryzae COCMIDRAFT_90970 I 0.420
COCSADRAFT_98214 Bipolaris sorokiniana COCSADRAFT_98214 I 0.420
COCVIDRAFT_100578 Bipolaris victoriae COCVIDRAFT_100578 I 0.420
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.464
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.464
CPC735_006120 Coccidioides posadasii CPC735_006120 I 0.420
CTRG_00206 Candida tropicalis CTRG_00206 I 0.430
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.507
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.470
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.472
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.443
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.508
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.485
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.508
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.505
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.472
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.442
EuGene.1300010342 Micromonas sp RCC299 EuGene.1300010342 I 0.418
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.497
e_gw1.5.923.1 Cochliobolus heterostrophus C5 e_gw1.5.923.1 I 0.420
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.420
fgenesh1_kg.C_scaffold_4000212 Cryphonectria parasitica fgenesh1_kg.C_scaffold_4000212 I 0.420
fgenesh1_pg.00866_#_414 Aspergillus carbonarius fgenesh1_pg.00866_#_414 I 0.420
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.445
G210_1137 Candida maltosa G210_1137 I 0.470
G647_02460 Cladophialophora carrionii G647_02460 I 0.420
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.479
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.514
GGTG_09659 Gaeumannomyces graminis GGTG_09659 I 0.420
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.448
GLYMA03G03771 Glycine max GLYMA03G03771 N 0.517
GLYMA13G05140 Glycine max GLYMA13G05140 I 0.441
GMDG_00086 Pseudogymnoascus destructans GMDG_00086 I 0.426
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.470
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.464
GSMUA_Achr2G19630_001 Musa acuminata GSMUA_Achr2G19630_001 I 0.565
GSTUM_00001197001 Tuber melanosporum GSTUM_00001197001 I 0.454
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.438
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.470
H072_4754 Dactylellina haptotyla H072_4754 I 0.427
HCBG_06756 Histoplasma capsulatum HCBG_06756 I 0.420
HMPREF1120_01828 Exophiala dermatitidis HMPREF1120_01828 I 0.420
HMPREF1624_01793 Sporothrix schenckii HMPREF1624_01793 I 0.420
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.452
JL09_g4180 Pichia kudriavzevii JL09_g4180 I 0.464
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.424
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.443
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.450
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.450
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.424
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.450
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.452
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.443
L804_02852 Cryptococcus gattii L804_02852 I 0.437
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.443
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.464
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.523
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.466
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.466
M7I_4892 Glarea lozoyensis M7I_4892 I 0.428
MAPG_02686 Magnaporthe poae MAPG_02686 I 0.420
MBM_05761 Marssonina brunnea MBM_05761 I 0.420
MDP0000301546 Malus domestica MDP0000301546 I 0.572
MDP0000310093 Malus domestica MDP0000310093 I 0.555
MDP0000828844 Malus domestica MDP0000828844 I 0.553
mgf001267m Mimulus guttatus mgf001267m I 0.510
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.426
MPH_02795 Macrophomina phaseolina MPH_02795 I 0.426
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.493
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.472
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.445
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.418
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.477
NCLIV_043670 Neospora caninum NCLIV_043670 I 0.442
O9G_002262 Rozella allomycis O9G_002262 I 0.444
orange1.1g006512m.g Citrus sinensis orange1.1g006512m.g I 0.514
PAAG_01986 Paracoccidioides sp lutzii PAAG_01986 I 0.426
PABG_02251 Paracoccidioides brasiliensis PABG_02251 I 0.426
Pc13g09020 Penicillium chrysogenum Pc13g09020 I 0.434
PCH_Pc13g09020 Penicillium rubens PCH_Pc13g09020 I 0.434
PDE_04795 Penicillium oxalicum PDE_04795 I 0.434
PDIP_30290 Penicillium digitatum PDIP_30290 I 0.434
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.577
PEX1_089460 Penicillium expansum PEX1_089460 I 0.434
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.533
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.533
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.498
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.498
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.470
PITC_061650 Penicillium italicum PITC_061650 I 0.434
PK18077.1 Cannabis sativa PK18077.1 I 0.513
Pm015842 Prunus mume Pm015842 I 0.552
PMAA_019170 Talaromyces marneffei PMAA_019170 I 0.436
PMAA_019170 Penicillium marneffei PMAA_019170 I 0.436
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.552
PTRG_08584 Pyrenophora triticirepentis PTRG_08584 I 0.428
PTT_11280 Pyrenophora teres PTT_11280 I 0.428
PV04_08099 Capronia semiimmersa PV04_08099 I 0.420
PV05_08806 Exophiala xenobiotica PV05_08806 I 0.420
PV06_10198 Exophiala oligosperma PV06_10198 I 0.420
PV07_11822 Cladophialophora immunda PV07_11822 I 0.420
PV08_09792 Exophiala spinifera PV08_09792 I 0.420
PV09_01265 Verruconis gallopava PV09_01265 I 0.464
PV10_02644 Exophiala mesophila PV10_02644 I 0.420
PV11_07328 Exophiala sideris PV11_07328 I 0.420
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.420
PXEA_0001177801 Protopolystoma xenopodis PXEA_0001177801 N 0.422
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.450
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.420
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.422
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.476
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.418
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.477
SEPMUDRAFT_150255 Sphaerulina musiva SEPMUDRAFT_150255 I 0.472
SETTUDRAFT_96271 Setosphaeria turcica SETTUDRAFT_96271 I 0.420
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.443
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.450
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.443
SNOG_08374 Stagonospora nodorum SNOG_08374 I 0.434
SNOG_08374 Phaeosphaeria nodorum SNOG_08374 I 0.434
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.533
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.470
SPBR_08754 Sporothrix brasiliensis SPBR_08754 I 0.420
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.487
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.443
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.450
TA04735 Theileria annulata TA04735 I 0.420
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.443
TCM_018380 Theobroma cacao TCM_018380 I 0.552
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.450
TGME49_010410 Toxoplasma gondii TGME49_010410 I 0.442
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.506
TP03_0469 Theileria parva TP03_0469 I 0.420
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.451
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.433
TSTA_027170 Talaromyces stipitatus TSTA_027170 I 0.436
U727_00431321111 Penicillium solitum U727_00431321111 I 0.434
UCRNP2_2405 Neofusicoccum parvum UCRNP2_2405 I 0.426
UREG_07427 Uncinocarpus reesii UREG_07427 I 0.420
V499_06692 Pseudogymnoascus pannorum V499_06692 I 0.426
VDAG_03330 Verticillium dahliae VDAG_03330 I 0.420
VDBG_06173 Verticillium albo atrum VDBG_06173 I 0.420
VDBG_06173 Verticillium alfalfae VDBG_06173 I 0.420
VHEMI02691 Torrubiella hemipterigena VHEMI02691 I 0.420
ATHMG Vitis vinifera VIT_14s0108g00040 I 0.519
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.544
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.443
NHP6A Saccharomyces cerevisiae YPR052C D 0.450
Z517_03232 Fonsecaea pedrosoi Z517_03232 I 0.420
Z518_06904 Rhinocladiella mackenziei Z518_06904 I 0.420
Z519_01307 Cladophialophora bantiana Z519_01307 I 0.420
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.450
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.450
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.450