AMTR_s00019p00232450 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00019p00232450 T000351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.854 0.980
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.854 0.980
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.723 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN07353 AP2 10 61

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07858.1 Cannabis sativa PK07858.1 D
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I
BHLH30 Arabidopsis thaliana AT1G68810 I
BHLH32 Arabidopsis thaliana AT3G25710 I
BGIOSGA026937 Oryza indica BGIOSGA026937 I
BGIOSGA029777 Oryza indica BGIOSGA029777 I
Bo2g138630 Brassica oleracea Bo2g138630 I
Bo6g095860 Brassica oleracea Bo6g095860 I
Bo6g108270 Brassica oleracea Bo6g108270 I
Bo7g081980 Brassica oleracea Bo7g081980 I
Bra004015 Brassica rapa Bra004015 I
Bra004338 Brassica rapa Bra004338 I
Bra025158 Brassica rapa Bra025158 I
Bra026510 Brassica rapa Bra026510 I
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I
F775_10096 Aegilops tauschii F775_10096 I
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I
GLYMA01G22530 Glycine max GLYMA01G22530 I
GLYMA02G11190 Glycine max GLYMA02G11190 I
GLYMA10G34910 Glycine max GLYMA10G34910 I
GLYMA17G19570 Glycine max GLYMA17G19570 I
GLYMA20G32660 Glycine max GLYMA20G32660 I
GRMZM2G043854 Zea mays GRMZM2G043854 I
GRMZM2G107276 Zea mays GRMZM2G107276 I
GRMZM2G526668 Zea mays GRMZM2G526668 I
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I
LPERR03G10060 Leersia perrieri LPERR03G10060 I
LPERR08G12910 Leersia perrieri LPERR08G12910 I
LPERR09G06880 Leersia perrieri LPERR09G06880 I
MLOC_66385 Hordeum vulgare MLOC_66385 I
MTR_1g093750 Medicago truncatula MTR_1g093750 I
OB03G21490 Oryza brachyantha OB03G21490 I
OBART03G11320 Oryza barthii OBART03G11320 I
OBART08G15650 Oryza barthii OBART08G15650 I
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I
OLONG_004075 Oryza longistaminata OLONG_004075 I
OMERI08G12930 Oryza meridionalis OMERI08G12930 I
OMERI09G07780 Oryza meridionalis OMERI09G07780 I
ONIVA03G12280 Oryza nivara ONIVA03G12280 I
ONIVA08G16750 Oryza nivara ONIVA08G16750 I
ONIVA09G09550 Oryza nivara ONIVA09G09550 I
OPUNC08G13730 Oryza punctata OPUNC08G13730 I
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I
OS03G0260600 Oryza sativa OS03G0260600 I
OS08G0432800 Oryza sativa OS08G0432800 I
OS09G0410700 Oryza sativa OS09G0410700 I
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I
Sb01g040450 Sorghum bicolor Sb01g040450 I
Sb07g021170 Sorghum bicolor Sb07g021170 I
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I
Si013911m.g Setaria italica Si013911m.g I
Si039730m.g Setaria italica Si039730m.g I
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I
TCM_011873 Theobroma cacao TCM_011873 I
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I
TRIUR3_31897 Triticum urartu TRIUR3_31897 I
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I
Ca_08440 Cicer arietinum Ca_08440 I
Ca_24775 Cicer arietinum Ca_24775 I
Cla000223 Citrullus lanatus Cla000223 I
Cla020671 Citrullus lanatus Cla020671 I
Pm029004 Prunus mume Pm029004 I
29738.m001043 Ricinus communis 29738.m001043 I
cassava16550.m1 Manihot esculenta cassava16550.m1 I
cassava46299.m1 Manihot esculenta cassava46299.m1 I
Cucsa.283920 Cucumis sativus Cucsa.283920 I
mg025182m Mimulus guttatus mg025182m I
mgf017635m Mimulus guttatus mgf017635m I
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I
Carubv10017470m.g Capsella rubella Carubv10017470m.g I
Carubv10020515m.g Capsella rubella Carubv10020515m.g I
Ciclev10020323m.g Citrus clementina Ciclev10020323m.g I
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I
Lus10021711.g Linum usitatissimum Lus10021711.g I
Lus10034271.g Linum usitatissimum Lus10034271.g I
Lus10035056.g Linum usitatissimum Lus10035056.g I
Lus10041493.g Linum usitatissimum Lus10041493.g I
MDP0000271420 Malus domestica MDP0000271420 I
MDP0000319726 Malus domestica MDP0000319726 I
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I
orange1.1g026943m.g Citrus sinensis orange1.1g026943m.g I
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N
GLYMA01G02930 Glycine max GLYMA01G02930 N
GLYMA02G37720 Glycine max GLYMA02G37720 N
GLYMA14G36010 Glycine max GLYMA14G36010 N
GRMZM2G176141 Zea mays GRMZM2G176141 N
MLOC_12832 Hordeum vulgare MLOC_12832 N
MTR_5g066080 Medicago truncatula MTR_5g066080 N
OB09G16590 Oryza brachyantha OB09G16590 N
OGLUM09G10310 Oryza glumaepatula OGLUM09G10310 N
OLONG_011765 Oryza longistaminata OLONG_011765 N
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N
PRUPE_ppa019545mg Prunus persica PRUPE_ppa019545mg N
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N
Sb02g024460 Sorghum bicolor Sb02g024460 N
Si030496m.g Setaria italica Si030496m.g N
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N
TCM_000997 Theobroma cacao TCM_000997 N
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N
Ca_14981 Cicer arietinum Ca_14981 N
Ca_18110 Cicer arietinum Ca_18110 N
Cla022500 Citrullus lanatus Cla022500 N
Pm002160 Prunus mume Pm002160 N
cassava34286.m1 Manihot esculenta cassava34286.m1 N
Cucsa.160650 Cucumis sativus Cucsa.160650 N
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N
evm.TU.supercontig_65.63 Carica papaya evm.TU.supercontig_65.63 N
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N
Gorai.012G124100 Gossypium raimondii Gorai.012G124100 N
MDP0000562627 Malus domestica MDP0000562627 N
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N
PK01498.1 Cannabis sativa PK01498.1 N