Bo4g190040 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g190040 T000824_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.734 0.875
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.677 0.792
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g190040.1 AP2 71 121

Links

Other AP2 family TFs
Other Brassica oleracea TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D 0.734
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.677
Pm018989 Prunus mume Pm018989 I 0.716
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.750
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.685
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.722
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.718
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.703
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.687
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.733
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.688
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.752
29729.m002292 Ricinus communis 29729.m002292 I 0.759
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.720
Pm015262 Prunus mume Pm015262 I 0.723
Pm003634 Prunus mume Pm003634 I 0.692
Cla012194 Citrullus lanatus Cla012194 I 0.681
Cla006713 Citrullus lanatus Cla006713 I 0.731
Cla001755 Citrullus lanatus Cla001755 I 0.688
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.722
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.677
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.677
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.718
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.731
PK07829.1 Cannabis sativa PK07829.1 I 0.682
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.754
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.734
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.737
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.734
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.737
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.694
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.697
TCM_043306 Theobroma cacao TCM_043306 I 0.712
MDP0000446783 Malus domestica MDP0000446783 I 0.716
MDP0000290585 Malus domestica MDP0000290585 I 0.723
MDP0000165880 Malus domestica MDP0000165880 I 0.719
MDP0000153866 Malus domestica MDP0000153866 I 0.687
MDP0000147009 Malus domestica MDP0000147009 I 0.716
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.707
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.707
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.703
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.716
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.679
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.684
OBART01G04210 Oryza barthii OBART01G04210 I 0.684
OB01G13930 Oryza brachyantha OB01G13930 I 0.684
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.706
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.691
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.677
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.686
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.711
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.714
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.689
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.684
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.711
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.688
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.685
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.688
F775_05774 Aegilops tauschii F775_05774 I 0.677
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.684
Bra017011 Brassica rapa Bra017011 I 0.807
Bo9g177130 Brassica oleracea Bo9g177130 I 0.681
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.684
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.716
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.708
TCM_043302 Theobroma cacao TCM_043302 I 0.712
TCM_043275 Theobroma cacao TCM_043275 I 0.727
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.691
Si002067m.g Setaria italica Si002067m.g I 0.694
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.731
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.691
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.677
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.723
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.677
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.752
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.742
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.691
DREB2A Oryza sativa OS01G0165000 I 0.684
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.684
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.684
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.684
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.684
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.684