Bra008460 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra008460 T001037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008460.1-P AP2 130 181

Links

Other AP2 family TFs
Other Brassica rapa TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.827
OS03G0815800 Oryza sativa OS03G0815800 I 0.680
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.715
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.819
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.730
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.813
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.819
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.818
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.817
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.827
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.721
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.685
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.814
TCM_027348 Theobroma cacao TCM_027348 I 0.820
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.827
Ca_05803 Cicer arietinum Ca_05803 I 0.678
Ca_20041 Cicer arietinum Ca_20041 I 0.827
Cla015583 Citrullus lanatus Cla015583 I 0.827
Pm013734 Prunus mume Pm013734 I 0.826
27446.m000475 Ricinus communis 27446.m000475 I 0.819
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.819
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.827
mgf023662m Mimulus guttatus mgf023662m I 0.827
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.775
ORUFI03G40350 Oryza rufipogon ORUFI03G40350 I 0.680
BGIOSGA009571 Oryza indica BGIOSGA009571 I 0.680
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.819
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.687
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.819
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.819
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.826
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.695
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.694
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I 0.679
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.701
LPERR03G32900 Leersia perrieri LPERR03G32900 I 0.694
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.827
OBART03G38710 Oryza barthii OBART03G38710 I 0.680
ORGLA03G0354400 Oryza glaberrima ORGLA03G0354400 I 0.680
OPUNC03G35790 Oryza punctata OPUNC03G35790 I 0.677
MDP0000264187 Malus domestica MDP0000264187 I 0.826
ONIVA03G40360 Oryza nivara ONIVA03G40360 I 0.680
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.827
OMERI03G35630 Oryza meridionalis OMERI03G35630 I 0.680
OGLUM03G38530 Oryza glumaepatula OGLUM03G38530 I 0.680
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.807
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.805
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.801
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.866
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.837
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.837
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.837
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.794
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.866
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.728
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.785
ERF084 Arabidopsis thaliana AT1G80580 N 0.837
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.712
Bo2g095830 Brassica oleracea Bo2g095830 N 0.818
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.837
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.712
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.712
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.712
OS05G0316800 Oryza sativa OS05G0316800 N 0.712
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.771
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.772
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.785
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.775
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.775
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.807
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.783
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.778
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.765
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.777