Sb01g040280 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb01g040280 T004943_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.754 0.920
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.740 0.880
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.721 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g040280.1 AP2 37 88

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
Cucsa.130200 Cucumis sativus Cucsa.130200 I
Cucsa.119440 Cucumis sativus Cucsa.119440 I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
29729.m002292 Ricinus communis 29729.m002292 I
Pm018989 Prunus mume Pm018989 I
Pm015262 Prunus mume Pm015262 I
Pm003634 Prunus mume Pm003634 I
Cla012194 Citrullus lanatus Cla012194 I
Cla006713 Citrullus lanatus Cla006713 I
Cla001755 Citrullus lanatus Cla001755 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
TRIUR3_17973 Triticum urartu TRIUR3_17973 I
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I
MDP0000880312 Malus domestica MDP0000880312 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
Pavir.J37967 Panicum virgatum Pavir.J37967 I
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
MDP0000446783 Malus domestica MDP0000446783 I
MDP0000290585 Malus domestica MDP0000290585 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000147009 Malus domestica MDP0000147009 I
Lus10034902.g Linum usitatissimum Lus10034902.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
OLONG_014228 Oryza longistaminata OLONG_014228 I
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I
OBART01G04210 Oryza barthii OBART01G04210 I
OB01G13930 Oryza brachyantha OB01G13930 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
MTR_5g083330 Medicago truncatula MTR_5g083330 I
MLOC_66686 Hordeum vulgare MLOC_66686 I
LPERR01G03760 Leersia perrieri LPERR01G03760 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I
OMERI01G04110 Oryza meridionalis OMERI01G04110 I
GLYMA13G38030 Glycine max GLYMA13G38030 I
GLYMA12G32400 Glycine max GLYMA12G32400 I
GLYMA12G11150 Glycine max GLYMA12G11150 I
GLYMA06G45680 Glycine max GLYMA06G45680 I
F775_05774 Aegilops tauschii F775_05774 I
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I
Bra006460 Brassica rapa Bra006460 I
Bo9g177130 Brassica oleracea Bo9g177130 I
Bo3g013160 Brassica oleracea Bo3g013160 I
BGIOSGA002846 Oryza indica BGIOSGA002846 I
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I
TCM_043306 Theobroma cacao TCM_043306 I
TCM_043302 Theobroma cacao TCM_043302 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Si002067m.g Setaria italica Si002067m.g I
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I
Sb09g016150 Sorghum bicolor Sb09g016150 I
Sb03g004980 Sorghum bicolor Sb03g004980 I
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
DREB2A Oryza sativa OS01G0165000 I
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I
OPUNC01G03970 Oryza punctata OPUNC01G03970 I
ONIVA01G04630 Oryza nivara ONIVA01G04630 I