BGIBMGA004104 (Bombyx mori)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 BGIBMGA004104 T014181_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.724 0.893
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.724 0.893
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.724 0.893
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.724 0.893
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.724 0.747
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.659 0.747
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.646 0.747
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.646 0.747
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.646 0.747
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.646 0.747
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.646 0.747
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.646 0.747
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.609 0.480
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.583 0.733
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.518 0.387
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.485 0.387
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA004104-TA ARID/BRIGHT 4 79

Links

Other ARID/BRIGHT family TFs
Other Bombyx mori TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-3 Caenorhabditis elegans WBGene00003602 D
WUBG_08518 Wuchereria bancrofti WUBG_08518 I
WUBG_10752 Wuchereria bancrofti WUBG_10752 I
Bm12053 Brugia malayi Bm12053 I
Bm14724 Brugia malayi Bm14724 I
Bm4894 Brugia malayi Bm4894 I
CBG19604 Caenorhabditis briggsae CBG19604 I
CBN07936 Caenorhabditis brenneri CBN07936 I
CBN19233 Caenorhabditis brenneri CBN19233 I
CBN20828 Caenorhabditis brenneri CBN20828 I
CJA04720 Caenorhabditis japonica CJA04720 I
CJA13646 Caenorhabditis japonica CJA13646 I
CRE06667 Caenorhabditis remanei CRE06667 I
CRE15289 Caenorhabditis remanei CRE15289 I
LOAG_05485 Loa loa LOAG_05485 I
LOAG_18352 Loa loa LOAG_18352 I
PPA02306 Pristionchus pacificus PPA02306 I
PPA20304 Pristionchus pacificus PPA20304 I
PPA21285 Pristionchus pacificus PPA21285 I
nhr-88 Caenorhabditis elegans WBGene00003678 I
WBGene00241910 Onchocerca volvulus WBGene00241910 I
WBGene00248075 Onchocerca volvulus WBGene00248075 I
Minc01725 Meloidogyne incognita Minc01725 I
Minc13525 Meloidogyne incognita Minc13525 I
Minc15420 Meloidogyne incognita Minc15420 I
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I
ACOC_0000732601 Angiostrongylus costaricensis ACOC_0000732601 I
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I
ASU_10946 Ascaris suum ASU_10946 I
BTMF_0000273701 Brugia timori BTMF_0000273701 I
BTMF_0001198801 Brugia timori BTMF_0001198801 I
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I
DME_0000480501 Dracunculus medinensis DME_0000480501 I
DME_0000960901 Dracunculus medinensis DME_0000960901 I
GPLIN_000268400 Globodera pallida GPLIN_000268400 I
GPLIN_000669000 Globodera pallida GPLIN_000669000 I
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I
HCOI00435200 Haemonchus contortus HCOI00435200 I
HCOI01268300 Haemonchus contortus HCOI01268300 I
HCOI02077900 Haemonchus contortus HCOI02077900 I
L596_g20569 Steinernema carpocapsae L596_g20569 I
L596_g25297 Steinernema carpocapsae L596_g25297 I
L596_g25666 Steinernema carpocapsae L596_g25666 I
L596_g27086 Steinernema carpocapsae L596_g27086 I
L596_g27130 Steinernema carpocapsae L596_g27130 I
L596_g3812 Steinernema carpocapsae L596_g3812 I
L889_g29204 Steinernema feltiae L889_g29204 I
L889_g29246 Steinernema feltiae L889_g29246 I
L889_g5777 Steinernema feltiae L889_g5777 I
L889_g6303 Steinernema feltiae L889_g6303 I
L889_g8361 Steinernema feltiae L889_g8361 I
L892_g19201 Steinernema scapterisci L892_g19201 I
L892_g21738 Steinernema scapterisci L892_g21738 I
L892_g650 Steinernema scapterisci L892_g650 I
L893_g27196 Steinernema glaseri L893_g27196 I
L893_g29388 Steinernema glaseri L893_g29388 I
L893_g29555 Steinernema glaseri L893_g29555 I
L893_g6878 Steinernema glaseri L893_g6878 I
L898_g10316 Steinernema monticolum L898_g10316 I
L898_g14928 Steinernema monticolum L898_g14928 I
L898_g23965 Steinernema monticolum L898_g23965 I
L898_g24498 Steinernema monticolum L898_g24498 I
L898_g4801 Steinernema monticolum L898_g4801 I
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I
NECAME_04545 Necator americanus NECAME_04545 I
NECAME_05125 Necator americanus NECAME_05125 I
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I
scaffold180-EXSNAP2012.20 Pristionchus exspectatus scaffold180-EXSNAP2012.20 I
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I
SMUV_0000428701 Syphacia muris SMUV_0000428701 I
SMUV_0000859101 Syphacia muris SMUV_0000859101 I
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I
TCNE_0001780601 Toxocara canis TCNE_0001780601 I
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I