TCF12 (Microcebus murinus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMICG00000009110 T035262_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000008303 bHLH 597 650

Links

Other bHLH family TFs
Other Microcebus murinus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
mgf017629m Mimulus guttatus mgf017629m I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
29729.m002292 Ricinus communis 29729.m002292 I
Pm018989 Prunus mume Pm018989 I
Pm015262 Prunus mume Pm015262 I
Cla006713 Citrullus lanatus Cla006713 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
TRIUR3_17973 Triticum urartu TRIUR3_17973 I
TRIUR3_17409 Triticum urartu TRIUR3_17409 I
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I
MDP0000880312 Malus domestica MDP0000880312 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
Pavir.J37967 Panicum virgatum Pavir.J37967 I
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I
MDP0000446783 Malus domestica MDP0000446783 I
MDP0000290585 Malus domestica MDP0000290585 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000147009 Malus domestica MDP0000147009 I
Lus10034902.g Linum usitatissimum Lus10034902.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
OMERI01G04110 Oryza meridionalis OMERI01G04110 I
OLONG_014228 Oryza longistaminata OLONG_014228 I
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I
OBART01G04210 Oryza barthii OBART01G04210 I
OB01G13930 Oryza brachyantha OB01G13930 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
MTR_5g083330 Medicago truncatula MTR_5g083330 I
MLOC_66686 Hordeum vulgare MLOC_66686 I
LPERR01G03760 Leersia perrieri LPERR01G03760 I
ONIVA01G04630 Oryza nivara ONIVA01G04630 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
F775_32062 Aegilops tauschii F775_32062 I
F775_05774 Aegilops tauschii F775_05774 I
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Si002067m.g Setaria italica Si002067m.g I
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I
Sb03g004980 Sorghum bicolor Sb03g004980 I
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I
BGIOSGA002846 Oryza indica BGIOSGA002846 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
DREB2A Oryza sativa OS01G0165000 I
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I
OPUNC01G03970 Oryza punctata OPUNC01G03970 I