ENSXMAG00000016545 (Xiphophorus maculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSXMAG00000016545 T038176_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.884 0.944
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.884 0.944
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.884 0.944
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.884 0.944
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.884 0.944
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.884 0.944
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.884 0.944
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.884 0.870
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.884 0.870
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.884 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000016625 bHLH 72 125

Links

Other bHLH family TFs
Other Xiphophorus maculatus TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.000
PK04952.1 Cannabis sativa PK04952.1 I 0.000
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.000
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.000
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.000
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.000
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.000
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.000
Ca_25633 Cicer arietinum Ca_25633 I 0.000
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.000
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.000
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.000
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.000
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.000
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.000
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.000
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.000
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.000
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.000
30032.m000462 Ricinus communis 30032.m000462 N 0.000
Pm028725 Prunus mume Pm028725 N 0.000
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.000
Ca_00826 Cicer arietinum Ca_00826 N 0.000
F775_02500 Aegilops tauschii F775_02500 N 0.000
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.000
F775_31255 Aegilops tauschii F775_31255 N 0.000
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.000
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.000
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.000
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.000
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.000
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.000
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.000
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.000
MDP0000288808 Malus domestica MDP0000288808 N 0.000
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.000
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.000
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.000
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.000
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.000
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.000
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.000
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.000
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.000
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.000
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.000
MDP0000229742 Malus domestica MDP0000229742 N 0.000
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.000
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.000
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.000
Bo01079s020 Brassica oleracea Bo01079s020 N 0.000
Bo4g035110 Brassica oleracea Bo4g035110 N 0.000
Bra005301 Brassica rapa Bra005301 N 0.000
Bra017262 Brassica rapa Bra017262 N 0.000
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.000
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.000
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.000
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.000
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.000
OBART12G03490 Oryza barthii OBART12G03490 N 0.000
OBART11G03590 Oryza barthii OBART11G03590 N 0.000
OB12G13420 Oryza brachyantha OB12G13420 N 0.000
OB11G12920 Oryza brachyantha OB11G12920 N 0.000
OB10G24100 Oryza brachyantha OB10G24100 N 0.000
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.000
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.000
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.000
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.000
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.000
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.000
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.000
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.000
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.000
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.000
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.000
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.000
OS11G0156000 Oryza sativa OS11G0156000 N 0.000
Si027632m.g Setaria italica Si027632m.g N 0.000
Si010849m.g Setaria italica Si010849m.g N 0.000
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.000
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.000
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.000
ARF31 Arabidopsis thaliana AT2G36080 N 0.000
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.000
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.000
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.000
TCM_022729 Theobroma cacao TCM_022729 N 0.000
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.000
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.000
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.000
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.000
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.000
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.000
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.000
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.000
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.000