OGLUM03G09560 (Oryza glumaepatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OGLUM03G09560 T042254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.888 0.902
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.888 0.902
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.888 0.882
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.888 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.902
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.875 0.902
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.863
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.862 0.824
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.862 0.824
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.855 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.852 0.784
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.852 0.765
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.852 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G09560.1 bHLH 656 706
OGLUM03G09560.2 bHLH 645 695
OGLUM03G09560.3 bHLH 592 642

Links

Other bHLH family TFs
Other Oryza glumaepatula TFs

854 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ovo Drosophila melanogaster FBgn0003028 D
lin-48 Caenorhabditis elegans WBGene00003033 D
tetur157g00030 Tetranychus urticae tetur157g00030 I
SMU15000684 Schmidtea mediterranea SMU15000684 I
LDEC009536 Leptinotarsa decemlineata LDEC009536 I
LCUP004963 Lucilia cuprina LCUP004963 I
HHAL005991-PA Halyomorpha halys HHAL005991-PA I
CLEC002514 Cimex lectularius CLEC002514 I
Sakowv30033343m.g Saccoglossus kowalevskii Sakowv30033343m.g I
Cflo_08035--XP_624482.2_APIME Camponotus floridanus Cflo_08035--XP_624482.2_APIME I
AARA001055 Anopheles arabiensis AARA001055 I
tetur12g02860 Tetranychus urticae tetur12g02860 I
tetur12g02810 Tetranychus urticae tetur12g02810 I
tetur12g02770 Tetranychus urticae tetur12g02770 I
tetur12g02760 Tetranychus urticae tetur12g02760 I
tetur12g02740 Tetranychus urticae tetur12g02740 I
TC008099 Tribolium castaneum TC008099 I
SPU_012448 Strongylocentrotus purpuratus SPU_012448 I
SMAR006131 Strigamia maritima SMAR006131 I
ASTEI07557 Anopheles stephensi ASTEI07557 I
TELCIR_07985 Teladorsagia circumcincta TELCIR_07985 I
SBAD_0001064501 Soboliphyme baturini SBAD_0001064501 I
NECAME_03083 Necator americanus NECAME_03083 I
L898_g2421 Steinernema monticolum L898_g2421 I
HCOI01936300 Haemonchus contortus HCOI01936300 I
BTMF_0001741201 Brugia timori BTMF_0001741201 I
PPAI008669 Phlebotomus papatasi PPAI008669 I
MDOA012259 Musca domestica MDOA012259 I
SINV17081 Solenopsis invicta SINV17081 I
ASIS014406 Anopheles sinensis ASIS014406 I
AMEC022552 Anopheles melas AMEC022552 I
AFUN010393 Anopheles funestus AFUN010393 I
ADIR001008 Anopheles dirus ADIR001008 I
ACUA027175 Anopheles culicifacies ACUA027175 I
ACHR004136 Anopheles christyi ACHR004136 I
AATE002741 Anopheles atroparvus AATE002741 I
CapteG147941 Capitella teleta CapteG147941 I
GF20355 Drosophila ananassae FBgn0097362 I
ovo Drosophila virilis FBgn0064309 I
CRE25436 Caenorhabditis remanei CRE25436 I
CPIJ018505 Culex quinquefasciatus CPIJ018505 I
CJA37604 Caenorhabditis japonica CJA37604 I
CJA03277 Caenorhabditis japonica CJA03277 I
CBN00506 Caenorhabditis brenneri CBN00506 I
CBG09216 Caenorhabditis briggsae CBG09216 I
GG18741 Drosophila erecta FBgn0110950 I
Bm3814 Brugia malayi Bm3814 I
BGIBMGA000988 Bombyx mori BGIBMGA000988 I
AGAP000114 Anopheles gambiae AGAP000114 I
ADAC004491 Anopheles darlingi ADAC004491 I
ACYPI003064 Acyrthosiphon pisum ACYPI003064 I
ACEP17857 Atta cephalotes ACEP17857 I
AAEL017521 Aedes aegypti AAEL017521 I
GA22634 Drosophila pseudoobscura FBgn0244037 I
RPRC002781 Rhodnius prolixus RPRC002781 I
PHUM086430 Pediculus humanus PHUM086430 I
MCINX009401 Melitaea cinxia MCINX009401 I
L798_11303 Zootermopsis nevadensis L798_11303 I
KGM_02259 Danaus plexippus KGM_02259 I
ISCW013547 Ixodes scapularis ISCW013547 I
HMEL006827 Heliconius melpomene HMEL006827 I
GB51354 Apis mellifera GB51354 I
CpipJ_CPIJ018505 Culex pipiens CpipJ_CPIJ018505 I
GE16381 Drosophila yakuba FBgn0233910 I
GK10250 Drosophila willistoni FBgn0212265 I
GD24377 Drosophila simulans FBgn0195718 I
GM12381 Drosophila sechellia FBgn0167318 I
GL26817 Drosophila persimilis FBgn0164398 I
GI21666 Drosophila mojavensis FBgn0144396 I
GH24684 Drosophila grimshawi FBgn0132140 I