CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr11551
(
Ophisaurus gracilis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ogr11551
T047534_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.914
0.962
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.914
0.962
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.914
0.962
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.914
0.962
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.890
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr11551
bHLH
105
157
QRQAANVRERKRMFNLNEAFDQLRKKVPTFAYEKRLSRIETLRLAIVYISFMT
Links
Other
bHLH
family TFs
Other
Ophisaurus gracilis
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
ACEP16595
Atta cephalotes
ACEP16595
I
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
CapteG172235
Capitella teleta
CapteG172235
I
CBN25379
Caenorhabditis brenneri
CBN25379
I
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
HmgZ
Drosophila melanogaster
FBgn0010228
I
HmgZ
Drosophila yakuba
FBgn0068145
I
GA14726
Drosophila pseudoobscura
FBgn0074753
I
GF11622
Drosophila ananassae
FBgn0088662
I
GG20749
Drosophila erecta
FBgn0112936
I
GH20784
Drosophila grimshawi
FBgn0128247
I
GI20867
Drosophila mojavensis
FBgn0143601
I
GL17523
Drosophila persimilis
FBgn0155126
I
GM15692
Drosophila sechellia
FBgn0170608
I
GD25171
Drosophila simulans
FBgn0196483
I
GJ20604
Drosophila virilis
FBgn0207743
I
GK15658
Drosophila willistoni
FBgn0217663
I
KGM_13852
Danaus plexippus
KGM_13852
I
MCINX001064
Melitaea cinxia
MCINX001064
I
RPRC006380
Rhodnius prolixus
RPRC006380
I
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
TriadG64155
Trichoplax adhaerens
TriadG64155
I
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
CLEC003860
Cimex lectularius
CLEC003860
I
ETH_00031100
Eimeria tenella
ETH_00031100
I
MDOA014797
Musca domestica
MDOA014797
I
PPAI002522
Phlebotomus papatasi
PPAI002522
I
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
AAEL002381
Aedes aegypti
AAEL002381
N
AAEL011414
Aedes aegypti
AAEL011414
N
ADAC005122
Anopheles darlingi
ADAC005122
N
AGAP012334
Anopheles gambiae
AGAP012334
N
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
CBG04066
Caenorhabditis briggsae
CBG04066
N
CBG09136
Caenorhabditis briggsae
CBG09136
N
CJA19030
Caenorhabditis japonica
CJA19030
N
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
CRE03995
Caenorhabditis remanei
CRE03995
N
EMIHUDRAFT_49282
Emiliania huxleyi
EMIHUDRAFT_49282
N
HmgD
Drosophila melanogaster
FBgn0004362
N
Ssrp
Drosophila melanogaster
FBgn0010278
N
HmgD
Drosophila yakuba
FBgn0068146
N
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
GF12460
Drosophila ananassae
FBgn0089497
N
GF13265
Drosophila ananassae
FBgn0090297
N
GG19998
Drosophila erecta
FBgn0112197
N
GH21124
Drosophila grimshawi
FBgn0128586
N
GH21151
Drosophila grimshawi
FBgn0128613
N
GI18728
Drosophila mojavensis
FBgn0141467
N
GI18750
Drosophila mojavensis
FBgn0141489
N
GL11071
Drosophila persimilis
FBgn0148681
N
GL16947
Drosophila persimilis
FBgn0154551
N
GM13209
Drosophila sechellia
FBgn0168140
N
GM15859
Drosophila sechellia
FBgn0170775
N
GD11622
Drosophila simulans
FBgn0183362
N
GD25013
Drosophila simulans
FBgn0196325
N
GJ21748
Drosophila virilis
FBgn0208866
N
GJ21774
Drosophila virilis
FBgn0208892
N
GK15924
Drosophila willistoni
FBgn0217926
N
GK22092
Drosophila willistoni
FBgn0224077
N
GE11532
Drosophila yakuba
FBgn0229332
N
GA30453
Drosophila pseudoobscura
FBgn0264590
N
GB54571
Apis mellifera
GB54571
N
HMEL015307
Heliconius melpomene
HMEL015307
N
KGM_13851
Danaus plexippus
KGM_13851
N
L798_13679
Zootermopsis nevadensis
L798_13679
N
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
NV15871
Nasonia vitripennis
NV15871
N
PHUM125270
Pediculus humanus
PHUM125270
N
PPA06513
Pristionchus pacificus
PPA06513
N
Smp_148930
Schistosoma mansoni
Smp_148930
N
TC012866
Tribolium castaneum
TC012866
N
hmg-4
Caenorhabditis elegans
WBGene00001974
N
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
LCUP005047
Lucilia cuprina
LCUP005047
N
LCUP016801
Lucilia cuprina
LCUP016801
N
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
Minc03634
Meloidogyne incognita
Minc03634
N
Minc04648
Meloidogyne incognita
Minc04648
N
AALB010797
Anopheles albimanus
AALB010797
N
AARA003413
Anopheles arabiensis
AARA003413
N
ACHR003270
Anopheles christyi
ACHR003270
N
ACOM026236
Anopheles coluzzii
ACOM026236
N
ADIR000495
Anopheles dirus
ADIR000495
N
AEPI002535
Anopheles epiroticus
AEPI002535
N
AFUN009599
Anopheles funestus
AFUN009599
N
AMAM007083
Anopheles maculatus
AMAM007083
N
AMEC017787
Anopheles melas
AMEC017787
N
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
ASIS014204
Anopheles sinensis
ASIS014204
N
MDOA007633
Musca domestica
MDOA007633
N
MDOA009531
Musca domestica
MDOA009531
N
PPAI002521
Phlebotomus papatasi
PPAI002521
N
A_01848
Schistosoma haematobium
A_01848
N
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
HCOI01420700
Haemonchus contortus
HCOI01420700
N
HCOI02106600
Haemonchus contortus
HCOI02106600
N
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
NECAME_16525
Necator americanus
NECAME_16525
N
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
TsM_000111500
Taenia solium
TsM_000111500
N
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N