Lus10041493.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10041493.g T050295_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07858.1
M01123_2.00 		Cannabis sativa
HCACGTGB
VCACGTGD		 PBM
Lambert et al.(2019)
pTH11370 		0.840 0.860
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10041493 bHLH 110 159

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07858.1 Cannabis sativa PK07858.1 D 0.840
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.879
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.890
BHLH30 Arabidopsis thaliana AT1G68810 I 0.870
BHLH32 Arabidopsis thaliana AT3G25710 I 0.890
BGIOSGA026937 Oryza indica BGIOSGA026937 I 0.870
BGIOSGA029777 Oryza indica BGIOSGA029777 I 0.870
Bo2g138630 Brassica oleracea Bo2g138630 I 0.890
Bo6g095860 Brassica oleracea Bo6g095860 I 0.846
Bo6g108270 Brassica oleracea Bo6g108270 I 0.870
Bo7g081980 Brassica oleracea Bo7g081980 I 0.890
Bra004015 Brassica rapa Bra004015 I 0.870
Bra004338 Brassica rapa Bra004338 I 0.870
Bra025158 Brassica rapa Bra025158 I 0.890
Bra026510 Brassica rapa Bra026510 I 0.890
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.870
F775_10096 Aegilops tauschii F775_10096 I 0.870
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.870
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.890
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.870
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.870
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.840
GLYMA17G19570 Glycine max GLYMA17G19570 I 0.840
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.840
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.870
GRMZM2G107276 Zea mays GRMZM2G107276 I 0.870
GRMZM2G526668 Zea mays GRMZM2G526668 I 0.870
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.860
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.840
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.870
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.870
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.870
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.870
LPERR09G06880 Leersia perrieri LPERR09G06880 I 0.870
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.870
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.840
OB03G21490 Oryza brachyantha OB03G21490 I 0.870
OBART03G11320 Oryza barthii OBART03G11320 I 0.870
OBART08G15650 Oryza barthii OBART08G15650 I 0.870
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.870
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I 0.870
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.870
OMERI08G12930 Oryza meridionalis OMERI08G12930 I 0.870
OMERI09G07780 Oryza meridionalis OMERI09G07780 I 0.870
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.870
ONIVA08G16750 Oryza nivara ONIVA08G16750 I 0.870
ONIVA09G09550 Oryza nivara ONIVA09G09550 I 0.870
OPUNC08G13730 Oryza punctata OPUNC08G13730 I 0.870
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.870
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I 0.870
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.870
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I 0.870
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I 0.870
OS03G0260600 Oryza sativa OS03G0260600 I 0.870
OS08G0432800 Oryza sativa OS08G0432800 I 0.870
OS09G0410700 Oryza sativa OS09G0410700 I 0.870
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.870
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.840
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.840
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.840
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.840
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.870
Sb07g021170 Sorghum bicolor Sb07g021170 I 0.870
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.870
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.870
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.840
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.840
Si013911m.g Setaria italica Si013911m.g I 0.870
Si039730m.g Setaria italica Si039730m.g I 0.870
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.870
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I 0.840
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.870
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.840
TCM_011873 Theobroma cacao TCM_011873 I 0.840
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.870
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.870
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.870
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.870
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.840
Ca_08440 Cicer arietinum Ca_08440 I 0.840
Ca_24775 Cicer arietinum Ca_24775 I 0.870
Cla000223 Citrullus lanatus Cla000223 I 0.870
Cla020671 Citrullus lanatus Cla020671 I 0.840
Pm029004 Prunus mume Pm029004 I 0.840
29738.m001043 Ricinus communis 29738.m001043 I 0.840
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.840
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.840
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.840
mg025182m Mimulus guttatus mg025182m I 0.840
mgf017635m Mimulus guttatus mgf017635m I 0.840
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.840
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.890
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.870
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.890
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.870
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.890
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.870
Ciclev10020323m.g Citrus clementina Ciclev10020323m.g I 0.852
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.840
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.840
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.840
Gorai.003G099500 Gossypium raimondii Gorai.003G099500 I 0.853
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.840
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.840
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.840
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.914
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.840
MDP0000271420 Malus domestica MDP0000271420 I 0.840
MDP0000319726 Malus domestica MDP0000319726 I 0.840
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I 0.840
orange1.1g026943m.g Citrus sinensis orange1.1g026943m.g I 0.852
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.840
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.870
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.840
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.840
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.840
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.890
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.870
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.870
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N 0.842
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N 0.858
GLYMA01G02930 Glycine max GLYMA01G02930 N 0.842
GRMZM2G176141 Zea mays GRMZM2G176141 N 0.858
MLOC_12832 Hordeum vulgare MLOC_12832 N 0.858
MTR_5g066080 Medicago truncatula MTR_5g066080 N 0.846
OLONG_011765 Oryza longistaminata OLONG_011765 N 0.848
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N 0.858
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N 0.842
Sb02g024460 Sorghum bicolor Sb02g024460 N 0.858
Si030496m.g Setaria italica Si030496m.g N 0.858
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N 0.858
TCM_000997 Theobroma cacao TCM_000997 N 0.842
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N 0.858
Ca_14981 Cicer arietinum Ca_14981 N 0.846
Ca_18110 Cicer arietinum Ca_18110 N 0.842
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N 0.858
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N 0.842
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N 0.847
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N 0.847
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N 0.847
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.845
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.845