Pavir.Aa03364 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Aa03364 T072302_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.884 0.984
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.833 0.683
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.795 0.619
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.795 0.619
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.789 0.571
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa03364.1.p bZIP 142 218
Pavir.Aa03364.2.p bZIP 141 217
Pavir.Aa03364.3.p bZIP 140 216

Links

Other bZIP family TFs
Other Panicum virgatum TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC078 Arabidopsis thaliana AT5G04410 D 0.000
NAC053 Arabidopsis thaliana AT3G10500 D 0.000
Aquca_030_00013 Aquilegia coerulea Aquca_030_00013 I 0.000
PK11467.1 Cannabis sativa PK11467.1 I 0.000
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.000
Bostr.22252s0010 Boechera stricta Bostr.22252s0010 I 0.000
Cagra.0834s0027 Capsella grandiflora Cagra.0834s0027 I 0.000
Cagra.9217s0021 Capsella grandiflora Cagra.9217s0021 I 0.000
Carubv10013370m.g Capsella rubella Carubv10013370m.g I 0.000
Ciclev10031147m.g Citrus clementina Ciclev10031147m.g I 0.000
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.000
Gorai.009G309000 Gossypium raimondii Gorai.009G309000 I 0.000
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.000
Lus10017458.g Linum usitatissimum Lus10017458.g I 0.000
MDP0000457996 Malus domestica MDP0000457996 I 0.000
MDP0000695714 Malus domestica MDP0000695714 I 0.000
orange1.1g007598m.g Citrus sinensis orange1.1g007598m.g I 0.000
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.000
SapurV1A.0213s0330 Salix purpurea SapurV1A.0213s0330 I 0.000
SapurV1A.0394s0050 Salix purpurea SapurV1A.0394s0050 I 0.000
Thhalv10013110m.g Eutrema salsugineum Thhalv10013110m.g I 0.000
Thhalv10020438m.g Eutrema salsugineum Thhalv10020438m.g I 0.000
POPTR_0010s23650 Populus trichocarpa POPTR_0010s23650 I 0.000
Bo1g143830 Brassica oleracea Bo1g143830 I 0.000
Bo3g002800 Brassica oleracea Bo3g002800 I 0.000
Bo9g180050 Brassica oleracea Bo9g180050 I 0.000
Bra005804 Brassica rapa Bra005804 I 0.000
Bra009456 Brassica rapa Bra009456 I 0.000
Bra028790 Brassica rapa Bra028790 I 0.000
Bra034120 Brassica rapa Bra034120 I 0.000
anac053 Arabidopsis lyrata fgenesh2_kg.3__1085__AT3G10500.1 I 0.000
POPTR_0008s03170 Populus trichocarpa POPTR_0008s03170 I 0.000
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.000
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.000
PRUPE_ppa003239mg Prunus persica PRUPE_ppa003239mg I 0.000
TCM_043360 Theobroma cacao TCM_043360 I 0.000
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.000
Cla013942 Citrullus lanatus Cla013942 I 0.000
Cla020837 Citrullus lanatus Cla020837 I 0.000
Pm017550 Prunus mume Pm017550 I 0.000
28872.m000248 Ricinus communis 28872.m000248 I 0.000
cassava22911.valid.m1 Manihot esculenta cassava22911.valid.m1 I 0.000
Cucsa.186150 Cucumis sativus Cucsa.186150 I 0.000