Eucgr.G00356 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.G00356 T142855_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G00356.1 C2H2 ZF 77 101
Eucgr.G00356.1 C2H2 ZF 106 130
Eucgr.G00356.1 C2H2 ZF 136 160
Eucgr.G00356.1 C2H2 ZF 166 191
Eucgr.G00356.1 C2H2 ZF 230 255
Eucgr.G00356.2 C2H2 ZF 77 101
Eucgr.G00356.2 C2H2 ZF 106 130
Eucgr.G00356.2 C2H2 ZF 136 161
Eucgr.G00356.2 C2H2 ZF 200 225

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.803
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.811
PK13777.1 Cannabis sativa PK13777.1 N 0.810
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.803
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.803
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.813
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.815
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.813
mgf016294m Mimulus guttatus mgf016294m N 0.779
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.815
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.813
30093.m000368 Ricinus communis 30093.m000368 N 0.811
Pm003925 Prunus mume Pm003925 N 0.809
Ca_00041 Cicer arietinum Ca_00041 N 0.821
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.811
TCM_006252 Theobroma cacao TCM_006252 N 0.806
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.809
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.813
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.799
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.813