22312_YPR008W (Saccharomyces mikatae)
Copper fist

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00649 (Copper-fist) IPR001083 22312_YPR008W T164179_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAA1
M08553_2.00 		Saccharomyces cerevisiae
SMGGSG
CSCCKS		 Misc
DeBoer et al.(2011)
YPR008W_1425 		1.000 1.000
CUP2
M08549_2.00 		Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.1 		0.718 0.718
CUP2
M08550_2.00 		Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.2 		0.718 0.718
CUP2
M08551_2.00 		Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.3 		0.718 0.718
CUP2
M10408_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CUP2_Q4 		0.718 0.718
CUP2
M08453_2.00 		Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG		 COMPILED
Mathelier et al.(2014)
MA0287.1 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22312_YPR008W Copper fist 2 40

Links

Other Copper fist family TFs
Other Saccharomyces mikatae TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGL2 Arabidopsis thaliana AT3G03450 D
RGL3 Arabidopsis thaliana AT5G17490 I
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I
MDP0000669451 Malus domestica MDP0000669451 I
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
Carubv10003592m.g Capsella rubella Carubv10003592m.g I
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
Pm014329 Prunus mume Pm014329 I
Ca_13295 Cicer arietinum Ca_13295 I
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
GLYMA18G04500 Glycine max GLYMA18G04500 I
GLYMA11G33720 Glycine max GLYMA11G33720 I
RGL3 Arabidopsis lyrata fgenesh2_kg.6__1749__AT5G17490.1 I
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I
Bra013973 Brassica rapa Bra013973 I
Bo9g160170 Brassica oleracea Bo9g160170 I
Bo5g149920 Brassica oleracea Bo5g149920 I
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N