gw1.103.78.1 (Physcomitrella patens)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 gw1.103.78.1 T165399_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.103.78.1 CSD 3 69

Links

Other CSD family TFs
Other Physcomitrella patens TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.773
Pm020837 Prunus mume Pm020837 I 0.712
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.727
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.727
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.758
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.773
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.985
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.985
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.770
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.803
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.727
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.742
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.803
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.727
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.712
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.712
PK01533.1 Cannabis sativa PK01533.1 N 0.727
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.712
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.803
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.803
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.712
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.712
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.712
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.727
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.758
EMIHUDRAFT_78118 Emiliania huxleyi EMIHUDRAFT_78118 N 0.727
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.712
OBART02G01600 Oryza barthii OBART02G01600 N 0.712
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.712
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.712
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.758
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.712
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.712
OS02G0121100 Oryza sativa OS02G0121100 N 0.712
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N 0.745
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.742
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.788
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.788
SELMODRAFT_451445 Selaginella moellendorffii SELMODRAFT_451445 N 0.712
SELMODRAFT_58801 Selaginella moellendorffii SELMODRAFT_58801 N 0.734