CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_1968
(
Byssochlamys spectabilis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
PVAR5_1968
T188435_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04521
M01006_2.00
Aspergillus nidulans
NDCAAACN
NGTTTGHN
PBM
Nakagawa et al.(2013)
ANID_04521
0.765
0.718
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD93358
Forkhead
856
945
ANEPYSALIYKALIAAPGRKLPLQGIYSWFEKNTSKGKDQSSKGWQNSIRHNLSMNAGFEAIKETTAGNKFVNYWRLTDDAIKSGGVEST
Links
Other
Forkhead
family TFs
Other
Byssochlamys spectabilis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0001514901
Haemonchus placei
HPLM_0001514901
N
TCLT_0000738501
Thelazia callipaeda
TCLT_0000738501
N
SVE_0358800
Strongyloides venezuelensis
SVE_0358800
N
SSTP_0000853200
Strongyloides stercoralis
SSTP_0000853200
N
SPAL_0001308000
Strongyloides papillosus
SPAL_0001308000
N
scaffold10-EXSNAP2012.60
Pristionchus exspectatus
scaffold10-EXSNAP2012.60
N
RSKR_0000834400
Rhabditophanes kr3021
RSKR_0000834400
N
PTRK_0000738400
Parastrongyloides trichosuri
PTRK_0000738400
N
OFLC_0001352601
Onchocerca flexuosa
OFLC_0001352601
N
nOo.2.0.1.g02662
Onchocerca ochengi
nOo.2.0.1.g02662
N
nLs.2.1.2.g07513
Litomosoides sigmodontis
nLs.2.1.2.g07513
N
nDi.2.2.2.g04953
Dirofilaria immitis
nDi.2.2.2.g04953
N
MhA1_Contig775.frz3.gene10
Meloidogyne hapla
MhA1_Contig775.frz3.gene10
N
Bm5461
Brugia malayi
Bm5461
N
HCOI01126400
Haemonchus contortus
HCOI01126400
N
genemark-nMf.1.1.scaf00700-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf00700-processed-gene-0.2
N
EEL_0001032101
Elaeophora elaphi
EEL_0001032101
N
DME_0000703101
Dracunculus medinensis
DME_0000703101
N
ASU_08146
Ascaris suum
ASU_08146
N
ANCCAN_11119
Ancylostoma caninum
ANCCAN_11119
N
WBGene00242326
Onchocerca volvulus
WBGene00242326
N
LOAG_18975
Loa loa
LOAG_18975
N
CJA11562
Caenorhabditis japonica
CJA11562
N
CBN10229
Caenorhabditis brenneri
CBN10229
N
CBG04528
Caenorhabditis briggsae
CBG04528
N