Afo_R011668 (Aptenodytes forsteri)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 Afo_R011668 T188928_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.827 0.988
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.827 0.988
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.827 0.988
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.827 0.988
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.827 0.988
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.827 0.988
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.827 0.988
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.827 0.988
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.827 0.988
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.827 0.988
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.751 0.889
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.751 0.889
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.751 0.889
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.751 0.889
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.751 0.889
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.745 0.765
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.745 0.765
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.745 0.765
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.745 0.765
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.679 0.469
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.679 0.469
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.679 0.469
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.679 0.469
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.679 0.469
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.679 0.469
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.679 0.469
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.678 0.469
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.678 0.469
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.678 0.469
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.678 0.469
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.678 0.469
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.678 0.469
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.678 0.469
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.678 0.469
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.665 0.457
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.665 0.432
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.665 0.432
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.665 0.432
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.665 0.432
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.665 0.432
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.665 0.432
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.665 0.432
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.665 0.432
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.665 0.432
FOXK2
M08118_2.00 		Homo sapiens
NNRTAAACANN
NNTGTTTAYNN		 ChIP-seq
Mathelier et al.(2014)
MA1103.1 		0.665 0.444
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R011668 Forkhead 491 574

Links

Other Forkhead family TFs
Other Aptenodytes forsteri TFs

663 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I
MDP0000289283 Malus domestica MDP0000289283 I
MDP0000155426 Malus domestica MDP0000155426 I
MDP0000131822 Malus domestica MDP0000131822 I
Lus10022021.g Linum usitatissimum Lus10022021.g I
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I
GLYMA06G45554 Glycine max GLYMA06G45554 I
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I
TCM_030020 Theobroma cacao TCM_030020 I
TCM_007868 Theobroma cacao TCM_007868 I
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I
TCM_007865 Theobroma cacao TCM_007865 I
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N
MDP0000407613 Malus domestica MDP0000407613 N
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N
TCM_033015 Theobroma cacao TCM_033015 N
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N
cassava5261.m1 Manihot esculenta cassava5261.m1 N
29933.m001454 Ricinus communis 29933.m001454 N
Pm015302 Prunus mume Pm015302 N
Pm009880 Prunus mume Pm009880 N
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N
TCM_033016 Theobroma cacao TCM_033016 N