Pavir.Ha01915 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ha01915 T203007_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ha01915.1.p GRAS 232 459

Links

Other GRAS family TFs
Other Panicum virgatum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.727
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.841
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.846
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.885
Ca_09530 Cicer arietinum Ca_09530 N 0.753
Cla012346 Citrullus lanatus Cla012346 N 0.736
Pm002956 Prunus mume Pm002956 N 0.758
30073.m002204 Ricinus communis 30073.m002204 N 0.736
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.731
mgf012242m Mimulus guttatus mgf012242m N 0.744
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.767
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.727
TCM_017746 Theobroma cacao TCM_017746 N 0.740
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.727
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.736
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.744
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.740
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.722
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.705
MDP0000397638 Malus domestica MDP0000397638 N 0.749
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.753
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.731
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.758
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.744
SCR Arabidopsis thaliana AT3G54220 N 0.727
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.903
Bo8g083500 Brassica oleracea Bo8g083500 N 0.727
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.727
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.749
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.749
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.924
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.934
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.758
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.894
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.881
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.731
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.705
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.916
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.903
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.868
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.903
SCR2 Oryza sativa OS12G0122000 N 0.903
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.749
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.758
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.912
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.740