ENSCSAG00000004373 (Chlorocebus sabaeus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCSAG00000004373 T208271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nkx6-1
M00466_2.00 		Mus musculus
NDTDATNRN
NYNATHAHN		 PBM
Berger et al.(2008)
Nkx6-1_2825 		0.867 1.000
NKX6-1
M09151_2.00 		Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY		 Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B 		0.867 1.000
Nkx6-1
M09200_2.00 		Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND		 Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A 		0.867 1.000
Nkx6-1
M09573_2.00 		Mus musculus
NDTAATKR
YMATTAHN		 Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975 		0.867 1.000
NKX6-1
M10718_2.00 		Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD		 Transfac
Matys et al.(2006)
V$NKX61_01 		0.867 1.000
NKX6-1
M10719_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX61_08 		0.867 1.000
Nkx6-3
M00522_2.00 		Mus musculus
NDYDATNRN
NYNATHRHN		 PBM
Berger et al.(2008)
Nkx6-3_3446 		0.867 0.965
NKX6-3
M05242_2.00 		Homo sapiens
NWTAATGRB
VYCATTAWN		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX 		0.867 0.965
NKX6-3
M05243_2.00 		Homo sapiens
DWTAATGRB
VYCATTAWH		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX 		0.867 0.965
NKX6-2
M05184_2.00 		Homo sapiens
DTAATTRN
NYAATTAH		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX 		0.858 0.982
NKX6-2
M05186_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX 		0.858 0.982
NKX6-2
M10711_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX62_Q2 		0.858 0.982
NKX6-2
M05185_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX 		0.858 0.982
NKX6-2
M05187_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX 		0.858 0.982
HGTX
M03869_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_1 		0.855 0.947
HGTX
M03870_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_2 		0.855 0.947
HGTX
M06542_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0191.1 		0.855 0.947
HGTX
M06360_2.00 		Drosophila melanogaster
DDTAATKA
TMATTAHH		 B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318 		0.855 0.947
HGTX
M06361_2.00 		Drosophila melanogaster
NWTAATKA
TMATTAWN		 B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318 		0.855 0.947
CBG20882
M01244_2.00 		Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN		 PBM
Lambert et al.(2019)
pTH11477 		0.811 0.737
Q0N4H9_NEMVE
M02165_2.00 		Nematostella vectensis
NNYRWWNNN
NNNWWYRNN		 PBM
Weirauch et al.(2014)
pTH6101 		0.685 0.579
NEMVEDRAFT_v1g129868
M02146_2.00 		Nematostella vectensis
NYRAWNDNN
NNHNWTYRN		 PBM
Weirauch et al.(2014)
pTH5749 		0.679 0.579
NK7.1
M03847_2.00 		Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB		 SELEX
Nitta et al.(2015)
NK7.1_1 		0.617 0.614
NK7.1
M03848_2.00 		Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN		 SELEX
Nitta et al.(2015)
NK7.1_2 		0.617 0.614
NK7.1
M06524_2.00 		Drosophila melanogaster
TTAATDR
YHATTAA		 B1H
Mathelier et al.(2014)
MA0196.1 		0.617 0.614
NK7.1
M06323_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321 		0.617 0.614
NK7.1
M06324_2.00 		Drosophila melanogaster
YTAATDR
YHATTAR		 B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321 		0.617 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000000716 Homeodomain 237 293

Links

Other Homeodomain family TFs
Other Chlorocebus sabaeus TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Med Drosophila melanogaster FBgn0011655 D 0.000
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.000
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.000
AAEL013896 Aedes aegypti AAEL013896 I 0.000
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.000
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.000
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.000
ADAC007516 Anopheles darlingi ADAC007516 I 0.000
AGAP002902 Anopheles gambiae AGAP002902 I 0.000
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.000
Bm3575 Brugia malayi Bm3575 I 0.000
CapteG179368 Capitella teleta CapteG179368 I 0.000
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.000
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.000
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.000
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.000
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.000
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.000
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.000
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.000
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.000
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.000
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.000
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.000
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.000
GF22974 Drosophila ananassae FBgn0099968 I 0.000
GG11819 Drosophila erecta FBgn0104114 I 0.000
GH18642 Drosophila grimshawi FBgn0126109 I 0.000
GI23400 Drosophila mojavensis FBgn0146126 I 0.000
GL23637 Drosophila persimilis FBgn0161227 I 0.000
GM16436 Drosophila sechellia FBgn0171351 I 0.000
GJ23092 Drosophila virilis FBgn0210194 I 0.000
GK11724 Drosophila willistoni FBgn0213735 I 0.000
GE10952 Drosophila yakuba FBgn0228782 I 0.000
GB50071 Apis mellifera GB50071 I 0.000
HelroG76435 Helobdella robusta HelroG76435 I 0.000
HelroG88197 Helobdella robusta HelroG88197 I 0.000
HMEL002203 Heliconius melpomene HMEL002203 I 0.000
ISCW018468 Ixodes scapularis ISCW018468 I 0.000
KGM_12572 Danaus plexippus KGM_12572 I 0.000
L798_13939 Zootermopsis nevadensis L798_13939 I 0.000
LOAG_08923 Loa loa LOAG_08923 I 0.000
LotgiG131078 Lottia gigantea LotgiG131078 I 0.000
MCINX014520 Melitaea cinxia MCINX014520 I 0.000
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.000
NV12984 Nasonia vitripennis NV12984 I 0.000
PHUM002670 Pediculus humanus PHUM002670 I 0.000
RPRC010188 Rhodnius prolixus RPRC010188 I 0.000
SINV15516 Solenopsis invicta SINV15516 I 0.000
SMAR013850 Strigamia maritima SMAR013850 I 0.000
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.000
TC010848 Tribolium castaneum TC010848 I 0.000
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.000
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.000
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.000
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.000
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.000
CLEC002594 Cimex lectularius CLEC002594 I 0.000
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.000
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.000
LCUP007928 Lucilia cuprina LCUP007928 I 0.000
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.000
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.000
Minc05381 Meloidogyne incognita Minc05381 I 0.000
Minc06628 Meloidogyne incognita Minc06628 I 0.000
AALB009485 Anopheles albimanus AALB009485 I 0.000
AARA004719 Anopheles arabiensis AARA004719 I 0.000
AATE010695 Anopheles atroparvus AATE010695 I 0.000
ACHR000067 Anopheles christyi ACHR000067 I 0.000
ACOM037505 Anopheles coluzzii ACOM037505 I 0.000
ACUA025512 Anopheles culicifacies ACUA025512 I 0.000
ADIR002761 Anopheles dirus ADIR002761 I 0.000
AEPI002385 Anopheles epiroticus AEPI002385 I 0.000
AFAF011208 Anopheles farauti AFAF011208 I 0.000
AFUN009864 Anopheles funestus AFUN009864 I 0.000
AMAM019778 Anopheles maculatus AMAM019778 I 0.000
AMEM015931 Anopheles merus AMEM015931 I 0.000
AMIN000723 Anopheles minimus AMIN000723 I 0.000
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.000
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.000
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.000
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.000
MDOA012885 Musca domestica MDOA012885 I 0.000
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.000
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.000
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.000
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.000
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.000
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.000
L596_g15 Steinernema carpocapsae L596_g15 I 0.000
L889_g28104 Steinernema feltiae L889_g28104 I 0.000
L889_g6780 Steinernema feltiae L889_g6780 I 0.000
L892_g27454 Steinernema scapterisci L892_g27454 I 0.000
L898_g17086 Steinernema monticolum L898_g17086 I 0.000
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.000
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.000
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.000
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.000
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.000
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.000
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.000
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.000
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.000
Minc15475 Meloidogyne incognita Minc15475 N 0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.000
L893_g8358 Steinernema glaseri L893_g8358 N 0.000
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.000