Thhalv10028592m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10028592m.g T229619_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.632 0.772
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028592m Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.000
MYB43 Arabidopsis thaliana AT5G16600 D 0.000
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.000
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.000
BGIOSGA030727 Oryza indica BGIOSGA030727 I 0.000
Bo2g013190 Brassica oleracea Bo2g013190 I 0.000
Bo3g009730 Brassica oleracea Bo3g009730 I 0.000
Bo4g101470 Brassica oleracea Bo4g101470 I 0.000
Bo9g163020 Brassica oleracea Bo9g163020 I 0.000
Bo9g166000 Brassica oleracea Bo9g166000 I 0.000
Bra006249 Brassica rapa Bra006249 I 0.000
Bra008764 Brassica rapa Bra008764 I 0.000
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I 0.000
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.000
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.000
F775_13107 Aegilops tauschii F775_13107 I 0.000
F775_17058 Aegilops tauschii F775_17058 I 0.000
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I 0.000
GLYMA01G42050 Glycine max GLYMA01G42050 I 0.000
GLYMA02G41180 Glycine max GLYMA02G41180 I 0.000
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.000
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.000
GLYMA11G03300 Glycine max GLYMA11G03300 I 0.000
GLYMA11G33620 Glycine max GLYMA11G33620 I 0.000
GLYMA14G39530 Glycine max GLYMA14G39530 I 0.000
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.000
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.000
GLYMA18G04580 Glycine max GLYMA18G04580 I 0.000
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.000
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.000
GRMZM2G169356 Zea mays GRMZM2G169356 I 0.000
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I 0.000
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.000
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I 0.000
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.000
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.000
MTR_3g065440 Medicago truncatula MTR_3g065440 I 0.000
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.000
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.000
OB02G38450 Oryza brachyantha OB02G38450 I 0.000
OB08G22860 Oryza brachyantha OB08G22860 I 0.000
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.000
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.000
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I 0.000
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.000
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I 0.000
OS02G0732600 Oryza sativa OS02G0732600 I 0.000
OS09G0401000 Oryza sativa OS09G0401000 I 0.000
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.000
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.000
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.000
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.000
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.000
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.000
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.000
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I 0.000
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.000
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I 0.000
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I 0.000
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I 0.000
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I 0.000
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.000
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.000
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.000
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.000
Si020225m.g Setaria italica Si020225m.g I 0.000
Si030750m.g Setaria italica Si030750m.g I 0.000
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.000
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.000
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.000
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.000
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.000
TCM_014956 Theobroma cacao TCM_014956 I 0.000
TCM_016054 Theobroma cacao TCM_016054 I 0.000
TCM_017051 Theobroma cacao TCM_017051 I 0.000
TCM_019116 Theobroma cacao TCM_019116 I 0.000
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.000
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.000
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.000
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.000
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.000
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.000
Ca_08722 Cicer arietinum Ca_08722 I 0.000
Ca_13286 Cicer arietinum Ca_13286 I 0.000
Ca_19393 Cicer arietinum Ca_19393 I 0.000
Cla003626 Citrullus lanatus Cla003626 I 0.000
Cla004104 Citrullus lanatus Cla004104 I 0.000
Cla011736 Citrullus lanatus Cla011736 I 0.000
Pm013020 Prunus mume Pm013020 I 0.000
Pm015564 Prunus mume Pm015564 I 0.000
Pm019472 Prunus mume Pm019472 I 0.000
Pm023573 Prunus mume Pm023573 I 0.000
29929.m004749 Ricinus communis 29929.m004749 I 0.000
30190.m011004 Ricinus communis 30190.m011004 I 0.000
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.000
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.000
cassava21367.m1 Manihot esculenta cassava21367.m1 I 0.000
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I 0.000
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.000
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.000
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.000
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I 0.000
Cucsa.006170 Cucumis sativus Cucsa.006170 I 0.000
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.000
Cucsa.302180 Cucumis sativus Cucsa.302180 I 0.000
fgenesh1_pg.scaffold_420000003 Physcomitrella patens fgenesh1_pg.scaffold_420000003 I 0.000
mgf017719m Mimulus guttatus mgf017719m I 0.000
mgf018940m Mimulus guttatus mgf018940m I 0.000
mgf025004m Mimulus guttatus mgf025004m I 0.000
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.000
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.000
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.000
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.000
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.000
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.000
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.000
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.000
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.000
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I 0.000
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.000
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.000
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.000
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I 0.000
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.000
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I 0.000
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.000
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.000
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.000
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.000
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.000
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I 0.000
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.000
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.000
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.000
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.000
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.000
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I 0.000
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I 0.000
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I 0.000
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.000
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.000
Lus10014569.g Linum usitatissimum Lus10014569.g I 0.000
Lus10024589.g Linum usitatissimum Lus10024589.g I 0.000
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.000
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.000
Lus10032226.g Linum usitatissimum Lus10032226.g I 0.000
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.000
MDP0000241111 Malus domestica MDP0000241111 I 0.000
MDP0000303239 Malus domestica MDP0000303239 I 0.000
MDP0000682032 Malus domestica MDP0000682032 I 0.000
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I 0.000
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.000
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.000
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.000
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I 0.000
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I 0.000
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I 0.000
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I 0.000
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I 0.000
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I 0.000
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I 0.000
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.000
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.000
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.000
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I 0.000
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I 0.000
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.000
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.000
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I 0.000
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.000
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.000
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I 0.000
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.000
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.000
PK08857.1 Cannabis sativa PK08857.1 I 0.000
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.000
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.000
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.000