fgenesh1_pm.00866_#_491 (Aspergillus carbonarius)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh1_pm.00866_#_491 T230860_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.862 0.930
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.623 0.456
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.623 0.456
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.623 0.456
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.623 0.456
NCU03266
M02224_2.00 		Neurospora crassa
NNBWWAKDRN
NYHMTWWVNN		 PBM
Weirauch et al.(2014)
pTH8814 		0.610 0.719
FGRRES_01100
M02131_2.00 		Fusarium graminearum
WTTAATTR
YAATTAAW		 PBM
Weirauch et al.(2014)
pTH5438 		0.609 0.702
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.601 0.421
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.601 0.421
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.601 0.421
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.601 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00866_#_491 Homeodomain 59 115

Links

Other Homeodomain family TFs
Other Aspergillus carbonarius TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY63 Arabidopsis thaliana AT1G66600 D
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY38 Arabidopsis thaliana AT5G22570 D
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I
mgf009193m Mimulus guttatus mgf009193m I
Carubv10002472m.g Capsella rubella Carubv10002472m.g I
Pm003014 Prunus mume Pm003014 I
Pm003013 Prunus mume Pm003013 I
Ca_18932 Cicer arietinum Ca_18932 I
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I
Carubv10012720m.g Capsella rubella Carubv10012720m.g I
Carubv10021420m.g Capsella rubella Carubv10021420m.g I
Carubv10021860m.g Capsella rubella Carubv10021860m.g I
Carubv10021899m.g Capsella rubella Carubv10021899m.g I
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
Carubv10022162m.g Capsella rubella Carubv10022162m.g I
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I
Bo2g095820 Brassica oleracea Bo2g095820 I
Bra023211 Brassica rapa Bra023211 I
Bra020197 Brassica rapa Bra020197 I
Bra020196 Brassica rapa Bra020196 I
Bra008459 Brassica rapa Bra008459 I
Bra008456 Brassica rapa Bra008456 I
Bra008454 Brassica rapa Bra008454 I
Bra002421 Brassica rapa Bra002421 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bra028918 Brassica rapa Bra028918 I
Bo2g024040 Brassica oleracea Bo2g024040 I
Bo01002s040 Brassica oleracea Bo01002s040 I
BGIOSGA017556 Oryza indica BGIOSGA017556 I
WRKY66 Arabidopsis thaliana AT1G80590 I
WRKY64 Arabidopsis thaliana AT1G66560 I
WRKY67 Arabidopsis thaliana AT1G66550 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR05G06630 Leersia perrieri LPERR05G06630 I
MLOC_74606 Hordeum vulgare MLOC_74606 I
MTR_2g075610 Medicago truncatula MTR_2g075610 I
MTR_2g075750 Medicago truncatula MTR_2g075750 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
OB05G17240 Oryza brachyantha OB05G17240 I
OBART05G08130 Oryza barthii OBART05G08130 I
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I
OLONG_019907 Oryza longistaminata OLONG_019907 I
ONIVA05G08650 Oryza nivara ONIVA05G08650 I
OPUNC05G07410 Oryza punctata OPUNC05G07410 I
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I