CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACHR009144
(
Anopheles christyi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ACHR009144
T231365_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.770
0.522
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.770
0.522
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.770
0.522
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.770
0.522
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.770
0.522
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.770
0.522
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.770
0.522
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.770
0.522
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.770
0.522
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.719
0.391
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.719
0.391
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.719
0.391
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACHR009144-PA
Homeodomain
34
79
RRQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEARVRV
Links
Other
Homeodomain
family TFs
Other
Anopheles christyi
TFs
1234 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.000
WUBG_12099
Wuchereria bancrofti
WUBG_12099
N
0.000
AAEL011380
Aedes aegypti
AAEL011380
N
0.000
ACEP16613
Atta cephalotes
ACEP16613
N
0.000
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.000
ADAC001494
Anopheles darlingi
ADAC001494
N
0.000
AGAP000005
Anopheles gambiae
AGAP000005
N
0.000
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.000
Bm4180
Brugia malayi
Bm4180
N
0.000
CapteG158220
Capitella teleta
CapteG158220
N
0.000
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.000
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.000
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.000
CJA09678
Caenorhabditis japonica
CJA09678
N
0.000
CJA42049
Caenorhabditis japonica
CJA42049
N
0.000
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.000
CRE02943
Caenorhabditis remanei
CRE02943
N
0.000
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.000
EFV53345
Trichinella spiralis
EFV53345
N
0.000
EFV57410
Trichinella spiralis
EFV57410
N
0.000
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.000
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.000
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.000
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.000
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.000
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.000
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.000
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.000
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.000
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.000
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.000
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.000
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.000
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.000
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.000
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.000
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.000
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.000
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.000
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.000
GF19115
Drosophila ananassae
FBgn0096126
N
0.000
GG17955
Drosophila erecta
FBgn0110175
N
0.000
GH12282
Drosophila grimshawi
FBgn0119761
N
0.000
GI10980
Drosophila mojavensis
FBgn0133743
N
0.000
GD17278
Drosophila simulans
FBgn0188840
N
0.000
GJ19445
Drosophila virilis
FBgn0206588
N
0.000
GK25058
Drosophila willistoni
FBgn0227017
N
0.000
GE17263
Drosophila yakuba
FBgn0234741
N
0.000
HelroG157726
Helobdella robusta
HelroG157726
N
0.000
HelroG157878
Helobdella robusta
HelroG157878
N
0.000
HelroG87827
Helobdella robusta
HelroG87827
N
0.000
ISCW017350
Ixodes scapularis
ISCW017350
N
0.000
LOAG_04936
Loa loa
LOAG_04936
N
0.000
NV15664
Nasonia vitripennis
NV15664
N
0.000
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.000
SINV22586
Solenopsis invicta
SINV22586
N
0.000
SMAR013695
Strigamia maritima
SMAR013695
N
0.000
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.000
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.000
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.000
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.000
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.000
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.000
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.000
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.000
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.000
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.000
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.000
AAI68534
Xenopus tropicalis
AAI68534
N
0.000
LCUP007363
Lucilia cuprina
LCUP007363
N
0.000
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.000
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.000
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.000
Minc01077
Meloidogyne incognita
Minc01077
N
0.000
Minc03268
Meloidogyne incognita
Minc03268
N
0.000
Minc08988
Meloidogyne incognita
Minc08988
N
0.000
AALB006743
Anopheles albimanus
AALB006743
N
0.000
AARA010318
Anopheles arabiensis
AARA010318
N
0.000
AATE018776
Anopheles atroparvus
AATE018776
N
0.000
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.000
ADIR011701
Anopheles dirus
ADIR011701
N
0.000
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.000
AFAF003948
Anopheles farauti
AFAF003948
N
0.000
AFUN010134
Anopheles funestus
AFUN010134
N
0.000
AMAM015540
Anopheles maculatus
AMAM015540
N
0.000
AMEC021909
Anopheles melas
AMEC021909
N
0.000
AMEM017336
Anopheles merus
AMEM017336
N
0.000
AMIN005344
Anopheles minimus
AMIN005344
N
0.000
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.000
ASIS000124
Anopheles sinensis
ASIS000124
N
0.000
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.000
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.000
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.000
ANCCEY_10333
Ancylostoma ceylanicum
ANCCEY_10333
N
0.000
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.000
ASU_03902
Ascaris suum
ASU_03902
N
0.000
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.000
BXY_1555400
Bursaphelenchus xylophilus
BXY_1555400
N
0.000
BXY_1714600
Bursaphelenchus xylophilus
BXY_1714600
N
0.000
D915_00818
Fasciola hepatica
D915_00818
N
0.000
D917_01254
Trichinella nativa
D917_01254
N
0.000
D917_08189
Trichinella nativa
D917_08189
N
0.000
D918_07195
Trichuris suis
D918_07195
N
0.000
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.000
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.000
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.000
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.000
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.000
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.000
GPLIN_000727200
Globodera pallida
GPLIN_000727200
N
0.000
GPUH_0001544201
Gongylonema pulchrum
GPUH_0001544201
N
0.000
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.000
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.000
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.000
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.000
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.000
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.000
L889_g13533
Steinernema feltiae
L889_g13533
N
0.000
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.000
L893_g5947
Steinernema glaseri
L893_g5947
N
0.000
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.000
MhA1_Contig113.frz3.gene9
Meloidogyne hapla
MhA1_Contig113.frz3.gene9
N
0.000
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.000
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.000
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.000
NECAME_09126
Necator americanus
NECAME_09126
N
0.000
nLs.2.1.2.g00300
Litomosoides sigmodontis
nLs.2.1.2.g00300
N
0.000
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.000
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.000
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.000
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.000
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.000
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.000
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.000
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.000
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.000
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.000
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.000
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.000
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.000
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.000
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.000
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.000
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.000
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.000
T265_10726
Opisthorchis viverrini
T265_10726
N
0.000
T265_12733
Opisthorchis viverrini
T265_12733
N
0.000
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.000
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.000
TELCIR_06008
Teladorsagia circumcincta
TELCIR_06008
N
0.000
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.000
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.000
TsM_000115400
Taenia solium
TsM_000115400
N
0.000
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.000
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.000