TCM_029050 (Theobroma cacao)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 TCM_029050 T246131_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY27123 LOB 14 112

Links

Other LOB family TFs
Other Theobroma cacao TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.798
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.848
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.848
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.788
mgf019664m Mimulus guttatus mgf019664m N 0.717
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.747
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.747
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.758
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.768
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.848
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.879
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.747
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.768
MDP0000257227 Malus domestica MDP0000257227 N 0.818
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.818
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.737
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.778
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.818
Bo1g134830 Brassica oleracea Bo1g134830 N 0.758
Bo5g132010 Brassica oleracea Bo5g132010 N 0.778
Bra021513 Brassica rapa Bra021513 N 0.758
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.747
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.778
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.758
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.788
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.788
LBD22 Arabidopsis thaliana AT3G13850 N 0.758
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.828
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.786
TCM_029052 Theobroma cacao TCM_029052 N 0.889
Ca_10077 Cicer arietinum Ca_10077 N 0.788
Cla015827 Citrullus lanatus Cla015827 N 0.798
Pm013344 Prunus mume Pm013344 N 0.798
28694.m000665 Ricinus communis 28694.m000665 N 0.838