ORUFI06G23790 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI06G23790 T277004_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.819 0.945
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.674 0.780
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.674 0.780
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.674 0.780
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.663 0.747
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI06G23790.1 Myb 15 61
ORUFI06G23790.1 Myb 67 110

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_20041 Cicer arietinum Ca_20041 I
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I
TCM_027348 Theobroma cacao TCM_027348 I
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I
Cla015583 Citrullus lanatus Cla015583 I
Pm013734 Prunus mume Pm013734 I
27446.m000475 Ricinus communis 27446.m000475 I
cassava38416.m1 Manihot esculenta cassava38416.m1 I
Cucsa.105790 Cucumis sativus Cucsa.105790 I
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I
mgf023662m Mimulus guttatus mgf023662m I
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I
GLYMA07G03041 Glycine max GLYMA07G03041 I
GLYMA08G23074 Glycine max GLYMA08G23074 I
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I
MTR_4g009260 Medicago truncatula MTR_4g009260 I
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I
MDP0000264187 Malus domestica MDP0000264187 I
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N
Lus10014345.g Linum usitatissimum Lus10014345.g N
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N
Lus10026053.g Linum usitatissimum Lus10026053.g N
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N
ERF084 Arabidopsis thaliana AT1G80580 N
BGIOSGA019608 Oryza indica BGIOSGA019608 N
Bo2g095830 Brassica oleracea Bo2g095830 N
Bra008460 Brassica rapa Bra008460 N
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N
OMERI05G10040 Oryza meridionalis OMERI05G10040 N
ONIVA05G11840 Oryza nivara ONIVA05G11840 N
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N
OS05G0316800 Oryza sativa OS05G0316800 N
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N