PRUPE_ppa008029mg (Prunus persica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PRUPE_ppa008029mg T278610_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.909 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.901 0.957
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.901 0.957
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.901 0.957
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.901 0.957
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.899 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.899 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.899 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.913
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.913
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.913
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ19441 Myb 78 123
EMJ19442 Myb 78 123

Links

Other Myb/SANT family TFs
Other Prunus persica TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm000717 Prunus mume Pm000717 N
SapurV1A.0041s0200 Salix purpurea SapurV1A.0041s0200 N
SapurV1A.0040s0520 Salix purpurea SapurV1A.0040s0520 N
orange1.1g045051m.g Citrus sinensis orange1.1g045051m.g N
Lus10040787.g Linum usitatissimum Lus10040787.g N
Gorai.009G098100 Gossypium raimondii Gorai.009G098100 N
Gorai.003G130400 Gossypium raimondii Gorai.003G130400 N
evm.TU.supercontig_81.122 Carica papaya evm.TU.supercontig_81.122 N
Eucgr.B02328 Eucalyptus grandis Eucgr.B02328 N
Ciclev10027926m.g Citrus clementina Ciclev10027926m.g N
Cucsa.117770 Cucumis sativus Cucsa.117770 N
cassava34369.m1 Manihot esculenta cassava34369.m1 N
cassava34368.m1 Manihot esculenta cassava34368.m1 N
28650.m000186 Ricinus communis 28650.m000186 N
POPTR_0001s24890 Populus trichocarpa POPTR_0001s24890 N
Pm000713 Prunus mume Pm000713 N
Pm000712 Prunus mume Pm000712 N
VIT_06s0004g04980 Vitis vinifera VIT_06s0004g04980 N
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
TCM_041810 Theobroma cacao TCM_041810 N
PRUPE_ppa026849mg Prunus persica PRUPE_ppa026849mg N
PRUPE_ppa021807mg Prunus persica PRUPE_ppa021807mg N
PRUPE_ppa019574mg Prunus persica PRUPE_ppa019574mg N
PRUPE_ppa002472mg Prunus persica PRUPE_ppa002472mg N
PRUPE_ppa002166mg Prunus persica PRUPE_ppa002166mg N
POPTR_0009s03850 Populus trichocarpa POPTR_0009s03850 N