cassava29775.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava29775.valid.m1 T296879_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.904 0.482
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.890 0.439
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.890 0.439
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.890 0.439
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.871 0.412
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29775.valid.m1 NAC/NAM 12 142

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH104 Arabidopsis thaliana AT4G14410 D
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I
Lus10022186.g Linum usitatissimum Lus10022186.g I
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I
Carubv10005335m.g Capsella rubella Carubv10005335m.g I
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I
Cucsa.255290 Cucumis sativus Cucsa.255290 I
Ca_23174 Cicer arietinum Ca_23174 I
MTR_1g043430 Medicago truncatula MTR_1g043430 I
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I
Bra041033 Brassica rapa Bra041033 I
Bra014923 Brassica rapa Bra014923 I
Bo7g040830 Brassica oleracea Bo7g040830 I
Bo4g126940 Brassica oleracea Bo4g126940 I
Bo1g102270 Brassica oleracea Bo1g102270 I
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N
cassava35418.valid.m1 Manihot esculenta cassava35418.valid.m1 N
POPTR_0008s16560 Populus trichocarpa POPTR_0008s16560 N
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N
Lus10021199.g Linum usitatissimum Lus10021199.g N
Lus10021876.g Linum usitatissimum Lus10021876.g N
Lus10041148.g Linum usitatissimum Lus10041148.g N
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N