CBG01353 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG01353 T301436_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.841 0.543
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.841 0.543
nhr-177
M02419_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Weirauch et al.(2014)
pTH9044 		0.802 0.486
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.771 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01353 Nuclear receptor 26 95

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01250 Caenorhabditis briggsae CBG01250 D 0.771
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.841
nhr-177 Caenorhabditis elegans WBGene00017503 D 0.802
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.900
CRE16082 Caenorhabditis remanei CRE16082 I 0.779
CRE18428 Caenorhabditis remanei CRE18428 I 0.790
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.986
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.756
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.924
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.939
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.881
CRE14845 Caenorhabditis remanei CRE14845 I 0.928
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.795
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.758
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.746
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.897
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.890
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.778
CBG01352 Caenorhabditis briggsae CBG01352 I 0.850
CRE09222 Caenorhabditis remanei CRE09222 I 0.989
CRE08755 Caenorhabditis remanei CRE08755 I 0.864
CRE08754 Caenorhabditis remanei CRE08754 I 0.767
CRE08753 Caenorhabditis remanei CRE08753 I 0.816
CRE08749 Caenorhabditis remanei CRE08749 I 0.775
CRE05779 Caenorhabditis remanei CRE05779 I 0.789
CJA19466 Caenorhabditis japonica CJA19466 I 0.773
CBN00299 Caenorhabditis brenneri CBN00299 I 0.914
CBG06387 Caenorhabditis briggsae CBG06387 I 0.826
CBG19144 Caenorhabditis briggsae CBG19144 I 0.915
CBG17898 Caenorhabditis briggsae CBG17898 I 0.793
CBG06614 Caenorhabditis briggsae CBG06614 I 0.829
CBN17580 Caenorhabditis brenneri CBN17580 N 0.860
nhr-203 Caenorhabditis elegans WBGene00019743 N 0.817
CBG01357 Caenorhabditis briggsae CBG01357 N 0.869
nhr-230 Caenorhabditis elegans WBGene00012446 N 0.753
CRE09227 Caenorhabditis remanei CRE09227 N 0.834
CRE09224 Caenorhabditis remanei CRE09224 N 0.787
CRE09225 Caenorhabditis remanei CRE09225 N 0.912