CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE09227
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE09227
T302144_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE09227
Nuclear receptor
20
89
SNCQVCGADSHGNHFGAVTCRACAAFFRRFGIKNNLKPCKNDNKCKTPSHGWFTCKSCRLKRCKDLGMTI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.000
Traes_4BS_A05D3DC53
Triticum aestivum
Traes_4BS_A05D3DC53
N
0.000
Traes_4DS_2CE9E3235
Triticum aestivum
Traes_4DS_2CE9E3235
N
0.000
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.000
Ca_09530
Cicer arietinum
Ca_09530
N
0.000
Cla012346
Citrullus lanatus
Cla012346
N
0.000
Pm002956
Prunus mume
Pm002956
N
0.000
30073.m002204
Ricinus communis
30073.m002204
N
0.000
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
0.000
mgf012242m
Mimulus guttatus
mgf012242m
N
0.000
Aquca_004_00566
Aquilegia coerulea
Aquca_004_00566
N
0.000
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.000
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.000
TCM_017746
Theobroma cacao
TCM_017746
N
0.000
Eucgr.K01320
Eucalyptus grandis
Eucgr.K01320
N
0.000
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.000
gene13644-v1.0-hybrid
Fragaria vesca
gene13644-v1.0-hybrid
N
0.000
Gorai.005G001300
Gossypium raimondii
Gorai.005G001300
N
0.000
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
0.000
MDP0000397638
Malus domestica
MDP0000397638
N
0.000
Pavir.Ha01915
Panicum virgatum
Pavir.Ha01915
N
0.000
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
0.000
Thhalv10010179m.g
Eutrema salsugineum
Thhalv10010179m.g
N
0.000
PK17372.1
Cannabis sativa
PK17372.1
N
0.000
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.000
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
0.000
SCR
Arabidopsis thaliana
AT3G54220
N
0.000
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
0.000
Bo8g083500
Brassica oleracea
Bo8g083500
N
0.000
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.000
GLYMA09G40620
Glycine max
GLYMA09G40620
N
0.000
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.000
GRMZM2G015080
Zea mays
GRMZM2G015080
N
0.000
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.000
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.000
LPERR11G01210
Leersia perrieri
LPERR11G01210
N
0.000
MLOC_64716
Hordeum vulgare
MLOC_64716
N
0.000
AMTR_s00077p00190160
Amborella trichopoda
AMTR_s00077p00190160
N
0.000
OBART12G01190
Oryza barthii
OBART12G01190
N
0.000
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
0.000
OLONG_010321
Oryza longistaminata
OLONG_010321
N
0.000
ORGLA12G0010300
Oryza glaberrima
ORGLA12G0010300
N
0.000
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.000
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
0.000
SCR2
Oryza sativa
OS12G0122000
N
0.000
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
0.000
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
0.000
Sb05g001500
Sorghum bicolor
Sb05g001500
N
0.000
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
0.000