GK19810 (Drosophila willistoni)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0221808 T319559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.746 0.746
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.746 0.746
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.746 0.746
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.746 0.746
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.731 0.731
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.723 0.723
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.723 0.723
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.723 0.723
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.723 0.723
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.723 0.723
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.723 0.723
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.723 0.723
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.723 0.723
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.723 0.723
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.723 0.723
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.723 0.723
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.723 0.723
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.708 0.708
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.708 0.708
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.708 0.708
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.708 0.708
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.708 0.708
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.708 0.708
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.708 0.708
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.708 0.708
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.708 0.708
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.708 0.708
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.708 0.708
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.708 0.708
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.708 0.708
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.708 0.708
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.708 0.708
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.708 0.708
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.708 0.708
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.708 0.708
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.708 0.708
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.708 0.708
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.708 0.708
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.708 0.708
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0248953 Runt 99 228

Links

Other Runt family TFs
Other Drosophila willistoni TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRB1 Arabidopsis thaliana AT1G49950 D
TRB2 Arabidopsis thaliana AT5G67580 D
PK06103.1 Cannabis sativa PK06103.1 D
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I
TRB3 Arabidopsis thaliana AT3G49850 I
BGIOSGA003871 Oryza indica BGIOSGA003871 I
Bo1g081300 Brassica oleracea Bo1g081300 I
Bo3g096520 Brassica oleracea Bo3g096520 I
Bo5g077530 Brassica oleracea Bo5g077530 I
Bo6g018740 Brassica oleracea Bo6g018740 I
Bo7g099090 Brassica oleracea Bo7g099090 I
Bo9g019040 Brassica oleracea Bo9g019040 I
Bra012919 Brassica rapa Bra012919 I
Bra018818 Brassica rapa Bra018818 I
Bra024438 Brassica rapa Bra024438 I
Bra029978 Brassica rapa Bra029978 I
Bra036035 Brassica rapa Bra036035 I
Bra037839 Brassica rapa Bra037839 I
Bra039650 Brassica rapa Bra039650 I
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I
GLYMA01G40220 Glycine max GLYMA01G40220 I
GLYMA05G22500 Glycine max GLYMA05G22500 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
GLYMA11G05070 Glycine max GLYMA11G05070 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GLYMA17G17370 Glycine max GLYMA17G17370 I
GRMZM2G087817 Zea mays GRMZM2G087817 I
GRMZM2G136887 Zea mays GRMZM2G136887 I
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I
LPERR01G18090 Leersia perrieri LPERR01G18090 I
MLOC_10278 Hordeum vulgare MLOC_10278 I
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I
MTR_1g041765 Medicago truncatula MTR_1g041765 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_4g097130 Medicago truncatula MTR_4g097130 I
MTR_5g015340 Medicago truncatula MTR_5g015340 I
MTR_8g494240 Medicago truncatula MTR_8g494240 I
OB01G30760 Oryza brachyantha OB01G30760 I
OBART01G21150 Oryza barthii OBART01G21150 I
OLONG_011068 Oryza longistaminata OLONG_011068 I
OMERI01G19490 Oryza meridionalis OMERI01G19490 I
OMERI01G19510 Oryza meridionalis OMERI01G19510 I
ONIVA01G23780 Oryza nivara ONIVA01G23780 I
OPUNC01G21220 Oryza punctata OPUNC01G21220 I
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I
OS01G0589300 Oryza sativa OS01G0589300 I
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I
POPTR_0006s14940 Populus trichocarpa POPTR_0006s14940 I
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I
Sb03g026470 Sorghum bicolor Sb03g026470 I
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I
Si002403m.g Setaria italica Si002403m.g I
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I
TCM_000807 Theobroma cacao TCM_000807 I
TCM_007242 Theobroma cacao TCM_007242 I
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I
TRIUR3_10613 Triticum urartu TRIUR3_10613 I
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I
TRB1 Vitis vinifera VIT_03s0091g01030 I
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I
Ca_02232 Cicer arietinum Ca_02232 I
Ca_08043 Cicer arietinum Ca_08043 I
Ca_09355 Cicer arietinum Ca_09355 I
Cla006547 Citrullus lanatus Cla006547 I
Cla014248 Citrullus lanatus Cla014248 I
Pm002374 Prunus mume Pm002374 I
Pm021139 Prunus mume Pm021139 I
Pm027209 Prunus mume Pm027209 I
29661.m000926 Ricinus communis 29661.m000926 I
29812.m000204 Ricinus communis 29812.m000204 I
29912.m005376 Ricinus communis 29912.m005376 I
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I
Cucsa.103240 Cucumis sativus Cucsa.103240 I
Cucsa.298390 Cucumis sativus Cucsa.298390 I
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I
mgf000125m Mimulus guttatus mgf000125m I
mgf009594m Mimulus guttatus mgf009594m I
mgf010975m Mimulus guttatus mgf010975m I
mgf011386m Mimulus guttatus mgf011386m I
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I
Carubv10009836m.g Capsella rubella Carubv10009836m.g I
Carubv10017722m.g Capsella rubella Carubv10017722m.g I
Carubv10026874m.g Capsella rubella Carubv10026874m.g I
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I
Eucgr.C00865 Eucalyptus grandis Eucgr.C00865 I
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I
Lus10011546.g Linum usitatissimum Lus10011546.g I
Lus10012092.g Linum usitatissimum Lus10012092.g I
Lus10014653.g Linum usitatissimum Lus10014653.g I
Lus10019260.g Linum usitatissimum Lus10019260.g I
Lus10025203.g Linum usitatissimum Lus10025203.g I
Lus10027621.g Linum usitatissimum Lus10027621.g I
Lus10030935.g Linum usitatissimum Lus10030935.g I
Lus10033775.g Linum usitatissimum Lus10033775.g I
Lus10040111.g Linum usitatissimum Lus10040111.g I
MDP0000234807 Malus domestica MDP0000234807 I
MDP0000239354 Malus domestica MDP0000239354 I
MDP0000265359 Malus domestica MDP0000265359 I
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I
Pavir.J27218 Panicum virgatum Pavir.J27218 I
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I
SapurV1A.0087s0150 Salix purpurea SapurV1A.0087s0150 I
SapurV1A.0108s0150 Salix purpurea SapurV1A.0108s0150 I
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I
PK00568.1 Cannabis sativa PK00568.1 I
PK19870.1 Cannabis sativa PK19870.1 I
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I