Sb03g026470 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g026470 T279184_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.741 0.787
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.700 0.745
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.693 0.809
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.693 0.809
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.693 0.809
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.693 0.809
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.683 0.723
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.683 0.723
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.670 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g026470.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G087817 Zea mays GRMZM2G087817 I 0.909
GRMZM2G136887 Zea mays GRMZM2G136887 I 0.909
Si002403m.g Setaria italica Si002403m.g I 0.899
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I 0.899
Pavir.J27218 Panicum virgatum Pavir.J27218 I 0.899
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I 0.865
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I 0.865
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I 0.865
TRIUR3_08672 Triticum urartu TRIUR3_08672 I 0.865
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I 0.813
mgf009594m Mimulus guttatus mgf009594m I 0.793
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I 0.782
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.782
Bo5g077530 Brassica oleracea Bo5g077530 I 0.775
Bra039650 Brassica rapa Bra039650 I 0.775
OB01G30760 Oryza brachyantha OB01G30760 I 0.771
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.762
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.753
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I 0.749
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I 0.749
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I 0.744
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I 0.744
TRB1 Arabidopsis thaliana AT1G49950 D 0.741
Bo6g018740 Brassica oleracea Bo6g018740 I 0.741
Bra018818 Brassica rapa Bra018818 I 0.741
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.741
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.741
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.741
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.741
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.741
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.741
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.741
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.738
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.738
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.736
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.736
OBART01G21150 Oryza barthii OBART01G21150 I 0.736
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.736
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.736
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.736
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.736
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.736
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.736
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.736
OS01G0589300 Oryza sativa OS01G0589300 I 0.736
TCM_029078 Theobroma cacao TCM_029078 I 0.736
Cla012798 Citrullus lanatus Cla012798 I 0.736
29706.m001328 Ricinus communis 29706.m001328 I 0.736
cassava34930.m1 Manihot esculenta cassava34930.m1 I 0.736
Cucsa.341020 Cucumis sativus Cucsa.341020 I 0.736
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I 0.736
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I 0.732
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I 0.731
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.724
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.723
Bo5g023860 Brassica oleracea Bo5g023860 I 0.716
Bra025967 Brassica rapa Bra025967 I 0.716
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.714
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.709
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.709
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.709
Lus10012092.g Linum usitatissimum Lus10012092.g I 0.707
Lus10025203.g Linum usitatissimum Lus10025203.g I 0.707
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.705
Bo8g067280 Brassica oleracea Bo8g067280 I 0.705
Bra016598 Brassica rapa Bra016598 I 0.705
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.705
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.705
Carubv10009890m.g Capsella rubella Carubv10009890m.g I 0.705
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I 0.705
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I 0.705
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.704
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.704
TCM_007242 Theobroma cacao TCM_007242 I 0.704
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.704
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.704
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.704
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.700
OB01G37330 Oryza brachyantha OB01G37330 I 0.700
OBART01G28260 Oryza barthii OBART01G28260 I 0.700
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.700
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.700
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.700
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.700
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.700
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.700
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.700
OS01G0708000 Oryza sativa OS01G0708000 D 0.700
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.698
GLYMA07G00930 Glycine max GLYMA07G00930 I 0.697
GLYMA08G20270 Glycine max GLYMA08G20270 I 0.697
Ca_08043 Cicer arietinum Ca_08043 I 0.697
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.697
Bo8g104830 Brassica oleracea Bo8g104830 I 0.695
TRB2 Arabidopsis thaliana AT5G67580 D 0.693
Bo3g096520 Brassica oleracea Bo3g096520 I 0.693
Bo9g019040 Brassica oleracea Bo9g019040 I 0.693
Bra024438 Brassica rapa Bra024438 I 0.693
Bra037837 Brassica rapa Bra037837 I 0.693
Bra037839 Brassica rapa Bra037839 I 0.693
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.693
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I 0.693
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.693
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.693
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.693
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.693
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.683
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.683
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.683
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.683
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.679
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.679
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.679
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.679
mgf004823m Mimulus guttatus mgf004823m I 0.677
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.676
TRB3 Arabidopsis thaliana AT3G49850 I 0.675
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.675
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.675
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.675
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.675
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.675
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.675
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.673
Bra036035 Brassica rapa Bra036035 I 0.672
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.670
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.670
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.670
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.670
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.670
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.670
Cla006547 Citrullus lanatus Cla006547 I 0.670
Pm002374 Prunus mume Pm002374 I 0.670
29661.m000926 Ricinus communis 29661.m000926 I 0.670
29812.m000204 Ricinus communis 29812.m000204 I 0.670
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.670
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.670
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I 0.670
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.670
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.670
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.670
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.670
MDP0000239354 Malus domestica MDP0000239354 I 0.670
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.670
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.670
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.670
PK06103.1 Cannabis sativa PK06103.1 D 0.670
PK19870.1 Cannabis sativa PK19870.1 I 0.670
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.670
Bra030992 Brassica rapa Bra030992 I 0.667
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.666
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.664
Bo6g116150 Brassica oleracea Bo6g116150 I 0.663
Bra016037 Brassica rapa Bra016037 I 0.663