CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001502601
(
Nippostrongylus brasiliensis
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
NBR_0001502601
T325822_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001502601-mRNA-1
SMAD
1
59
MESSPSRWEVAGRKGFPHVVYARVFRWPDLHKNELRHLSKCECAFDLKCDSVGLFCFCS
Links
Other
SMAD
family TFs
Other
Nippostrongylus brasiliensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00026p00180130
Amborella trichopoda
AMTR_s00026p00180130
I
0.000
BGIOSGA004611
Oryza indica
BGIOSGA004611
I
0.000
BGIOSGA017796
Oryza indica
BGIOSGA017796
I
0.000
Bo3g074840
Brassica oleracea
Bo3g074840
I
0.000
Bra001784
Brassica rapa
Bra001784
I
0.000
Bra015266
Brassica rapa
Bra015266
I
0.000
BRADI2G21060
Brachypodium distachyon
BRADI2G21060
I
0.000
BRADI3G18070
Brachypodium distachyon
BRADI3G18070
I
0.000
GLYMA07G03041
Glycine max
GLYMA07G03041
I
0.000
GLYMA08G23074
Glycine max
GLYMA08G23074
I
0.000
GLYMA08G43300
Glycine max
GLYMA08G43300
I
0.000
GLYMA12G26836
Glycine max
GLYMA12G26836
I
0.000
GLYMA13G30990
Glycine max
GLYMA13G30990
I
0.000
GLYMA15G08370
Glycine max
GLYMA15G08370
I
0.000
GLYMA18G10290
Glycine max
GLYMA18G10290
I
0.000
GSMUA_Achr1G25890_001
Musa acuminata
GSMUA_Achr1G25890_001
I
0.000
GSMUA_Achr4G23620_001
Musa acuminata
GSMUA_Achr4G23620_001
I
0.000
GSMUA_Achr4G33270_001
Musa acuminata
GSMUA_Achr4G33270_001
I
0.000
GSMUA_Achr6G00250_001
Musa acuminata
GSMUA_Achr6G00250_001
I
0.000
GSMUA_Achr7G03640_001
Musa acuminata
GSMUA_Achr7G03640_001
I
0.000
GSMUA_Achr8G03550_001
Musa acuminata
GSMUA_Achr8G03550_001
I
0.000
GSMUA_Achr9G11480_001
Musa acuminata
GSMUA_Achr9G11480_001
I
0.000
GSMUA_AchrUn_randomG16100_001
Musa acuminata
GSMUA_AchrUn_randomG16100_001
I
0.000
LPERR01G29260
Leersia perrieri
LPERR01G29260
I
0.000
LPERR05G17480
Leersia perrieri
LPERR05G17480
I
0.000
MLOC_73358
Hordeum vulgare
MLOC_73358
I
0.000
MTR_4g009260
Medicago truncatula
MTR_4g009260
I
0.000
OB01G42720
Oryza brachyantha
OB01G42720
I
0.000
OBART01G33870
Oryza barthii
OBART01G33870
I
0.000
OBART05G21580
Oryza barthii
OBART05G21580
I
0.000
OGLUM01G38110
Oryza glumaepatula
OGLUM01G38110
I
0.000
OGLUM05G22790
Oryza glumaepatula
OGLUM05G22790
I
0.000
OLONG_021733
Oryza longistaminata
OLONG_021733
I
0.000
OMERI01G30710
Oryza meridionalis
OMERI01G30710
I
0.000
OMERI05G19490
Oryza meridionalis
OMERI05G19490
I
0.000
ONIVA01G38670
Oryza nivara
ONIVA01G38670
I
0.000
ONIVA05G22270
Oryza nivara
ONIVA05G22270
I
0.000
OPUNC01G32930
Oryza punctata
OPUNC01G32930
I
0.000
OPUNC05G19230
Oryza punctata
OPUNC05G19230
I
0.000
ORGLA01G0278100
Oryza glaberrima
ORGLA01G0278100
I
0.000
ORGLA05G0187600
Oryza glaberrima
ORGLA05G0187600
I
0.000
ORUFI01G37120
Oryza rufipogon
ORUFI01G37120
I
0.000
ORUFI05G22850
Oryza rufipogon
ORUFI05G22850
I
0.000
OS01G0797600
Oryza sativa
OS01G0797600
I
0.000
OS05G0497300
Oryza sativa
OS05G0497300
I
0.000
PGSC0003DMG400000091
Solanum tuberosum
PGSC0003DMG400000091
I
0.000
PGSC0003DMG400012828
Solanum tuberosum
PGSC0003DMG400012828
I
0.000
PGSC0003DMG400028853
Solanum tuberosum
PGSC0003DMG400028853
I
0.000
POPTR_0001s32050
Populus trichocarpa
POPTR_0001s32050
I
0.000
POPTR_0001s40770
Populus trichocarpa
POPTR_0001s40770
I
0.000
POPTR_0011s05580
Populus trichocarpa
POPTR_0011s05580
I
0.000
POPTR_0011s11620
Populus trichocarpa
POPTR_0011s11620
I
0.000
POPTR_0013s15440
Populus trichocarpa
POPTR_0013s15440
I
0.000
POPTR_0017s08090
Populus trichocarpa
POPTR_0017s08090
I
0.000
PRUPE_ppa020928mg
Prunus persica
PRUPE_ppa020928mg
I
0.000
Sb04g035160
Sorghum bicolor
Sb04g035160
I
0.000
Si002729m.g
Setaria italica
Si002729m.g
I
0.000
Si008428m.g
Setaria italica
Si008428m.g
I
0.000
Si023088m.g
Setaria italica
Si023088m.g
I
0.000
Solyc01g095500.2
Solanum lycopersicum
Solyc01g095500.2
I
0.000
Solyc12g049560.1
Solanum lycopersicum
Solyc12g049560.1
I
0.000
TCM_027348
Theobroma cacao
TCM_027348
I
0.000
TCM_031608
Theobroma cacao
TCM_031608
I
0.000
VIT_09s0002g08830
Vitis vinifera
VIT_09s0002g08830
I
0.000
VIT_12s0028g03270
Vitis vinifera
VIT_12s0028g03270
I
0.000
VIT_19s0014g02240
Vitis vinifera
VIT_19s0014g02240
I
0.000
Ca_11261
Cicer arietinum
Ca_11261
I
0.000
Ca_20041
Cicer arietinum
Ca_20041
I
0.000
Ca_20544
Cicer arietinum
Ca_20544
I
0.000
Ca_22534
Cicer arietinum
Ca_22534
I
0.000
Cla015583
Citrullus lanatus
Cla015583
I
0.000
Cla020000
Citrullus lanatus
Cla020000
I
0.000
Pm013734
Prunus mume
Pm013734
I
0.000
27446.m000475
Ricinus communis
27446.m000475
I
0.000
27904.m000217
Ricinus communis
27904.m000217
I
0.000
30190.m011321
Ricinus communis
30190.m011321
I
0.000
cassava20937.m1
Manihot esculenta
cassava20937.m1
I
0.000
cassava37846.valid.m1
Manihot esculenta
cassava37846.valid.m1
I
0.000
cassava38416.m1
Manihot esculenta
cassava38416.m1
I
0.000
Cucsa.105790
Cucumis sativus
Cucsa.105790
I
0.000
Cucsa.126880
Cucumis sativus
Cucsa.126880
I
0.000
Cucsa.201950
Cucumis sativus
Cucsa.201950
I
0.000
fgenesh1_pg.scaffold_23000002
Physcomitrella patens
fgenesh1_pg.scaffold_23000002
I
0.000
mgf019214m
Mimulus guttatus
mgf019214m
I
0.000
mgf023662m
Mimulus guttatus
mgf023662m
I
0.000
Aquca_036_00070
Aquilegia coerulea
Aquca_036_00070
I
0.000
Ciclev10009484m.g
Citrus clementina
Ciclev10009484m.g
I
0.000
Ciclev10016276m.g
Citrus clementina
Ciclev10016276m.g
I
0.000
Ciclev10016463m.g
Citrus clementina
Ciclev10016463m.g
I
0.000
Ciclev10027171m.g
Citrus clementina
Ciclev10027171m.g
I
0.000
evm.TU.supercontig_10.125
Carica papaya
evm.TU.supercontig_10.125
I
0.000
evm.TU.supercontig_131.83
Carica papaya
evm.TU.supercontig_131.83
I
0.000
evm.TU.supercontig_27.16
Carica papaya
evm.TU.supercontig_27.16
I
0.000
gene15953-v1.0-hybrid
Fragaria vesca
gene15953-v1.0-hybrid
I
0.000
gene29738-v1.0-hybrid
Fragaria vesca
gene29738-v1.0-hybrid
I
0.000
Gorai.002G067600
Gossypium raimondii
Gorai.002G067600
I
0.000
Gorai.005G200200
Gossypium raimondii
Gorai.005G200200
I
0.000
Gorai.006G088000
Gossypium raimondii
Gorai.006G088000
I
0.000
Gorai.006G107500
Gossypium raimondii
Gorai.006G107500
I
0.000
Gorai.009G375700
Gossypium raimondii
Gorai.009G375700
I
0.000
Gorai.010G155900
Gossypium raimondii
Gorai.010G155900
I
0.000
Gorai.010G256600
Gossypium raimondii
Gorai.010G256600
I
0.000
Gorai.011G029800
Gossypium raimondii
Gorai.011G029800
I
0.000
Lus10015415.g
Linum usitatissimum
Lus10015415.g
I
0.000
MDP0000264187
Malus domestica
MDP0000264187
I
0.000
orange1.1g026240m.g
Citrus sinensis
orange1.1g026240m.g
I
0.000
orange1.1g028454m.g
Citrus sinensis
orange1.1g028454m.g
I
0.000
orange1.1g047950m.g
Citrus sinensis
orange1.1g047950m.g
I
0.000
Pavir.Ca01358
Panicum virgatum
Pavir.Ca01358
I
0.000
Pavir.Ea03147
Panicum virgatum
Pavir.Ea03147
I
0.000
Pavir.Eb03458
Panicum virgatum
Pavir.Eb03458
I
0.000
Pavir.Fa01730
Panicum virgatum
Pavir.Fa01730
I
0.000
Pavir.Fb00952
Panicum virgatum
Pavir.Fb00952
I
0.000
Pavir.Fb01486
Panicum virgatum
Pavir.Fb01486
I
0.000
Pavir.J14354
Panicum virgatum
Pavir.J14354
I
0.000
SapurV1A.0058s0710
Salix purpurea
SapurV1A.0058s0710
I
0.000
SapurV1A.1000s0130
Salix purpurea
SapurV1A.1000s0130
I
0.000
SapurV1A.1325s0040
Salix purpurea
SapurV1A.1325s0040
I
0.000
SapurV1A.2062s0030
Salix purpurea
SapurV1A.2062s0030
I
0.000
Thhalv10003431m.g
Eutrema salsugineum
Thhalv10003431m.g
I
0.000
ERF084
Arabidopsis thaliana
AT1G80580
N
0.000
BGIOSGA019608
Oryza indica
BGIOSGA019608
N
0.000
Bo2g095830
Brassica oleracea
Bo2g095830
N
0.000
Bra008460
Brassica rapa
Bra008460
N
0.000
fgenesh1_pm.C_scaffold_2001935
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2001935
N
0.000
OMERI05G10040
Oryza meridionalis
OMERI05G10040
N
0.000
ONIVA05G11840
Oryza nivara
ONIVA05G11840
N
0.000
ORUFI05G12300
Oryza rufipogon
ORUFI05G12300
N
0.000
OS05G0316800
Oryza sativa
OS05G0316800
N
0.000
PGSC0003DMG400010135
Solanum tuberosum
PGSC0003DMG400010135
N
0.000
SELMODRAFT_412693
Selaginella moellendorffii
SELMODRAFT_412693
N
0.000
SELMODRAFT_417258
Selaginella moellendorffii
SELMODRAFT_417258
N
0.000
SELMODRAFT_428344
Selaginella moellendorffii
SELMODRAFT_428344
N
0.000
SELMODRAFT_428599
Selaginella moellendorffii
SELMODRAFT_428599
N
0.000
Solyc03g117230.1
Solanum lycopersicum
Solyc03g117230.1
N
0.000
e_gw1.14.213.1
Physcomitrella patens
e_gw1.14.213.1
N
0.000
e_gw1.145.79.1
Physcomitrella patens
e_gw1.145.79.1
N
0.000
e_gw1.15.234.1
Physcomitrella patens
e_gw1.15.234.1
N
0.000
e_gw1.276.69.1
Physcomitrella patens
e_gw1.276.69.1
N
0.000
gw1.204.54.1
Physcomitrella patens
gw1.204.54.1
N
0.000
gw1.340.39.1
Physcomitrella patens
gw1.340.39.1
N
0.000
Bostr.20129s0456
Boechera stricta
Bostr.20129s0456
N
0.000
Cagra.1725s0082
Capsella grandiflora
Cagra.1725s0082
N
0.000
Carubv10022119m.g
Capsella rubella
Carubv10022119m.g
N
0.000
Eucgr.F03941
Eucalyptus grandis
Eucgr.F03941
N
0.000
Lus10014345.g
Linum usitatissimum
Lus10014345.g
N
0.000
Lus10026053.g
Linum usitatissimum
Lus10026053.g
N
0.000
Thhalv10000556m.g
Eutrema salsugineum
Thhalv10000556m.g
N
0.000
Thhalv10019474m.g
Eutrema salsugineum
Thhalv10019474m.g
N
0.000